Os04g0430600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0430600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.47 | 0.705 | 9.46 | 2.08 | 0.585 | 1.53 | 0.351 | 0.8 | 0.717 | 22.2 | 52.71 | 1392 | -- | -- |
| 226.14 | 0.7 | 9.46 | 2.18 | 0.716 | 1.71 | 0.318 | -- | 0.734 | 22.7 | 52.09 | 1284 | -- | -- |
| 225.62 | 0.7 | 9.46 | 2.13 | 0.669 | 1.59 | -- | 0.689 | 0.716 | 22.6 | 54 | 1309 | -- | -- |
| 226.46 | 0.701 | 9.46 | 2.16 | 0.71 | 1.68 | -- | -- | 0.733 | 22.8 | 51.99 | 1285 | -- | -- |
| 244.75 | 0.729 | 9.44 | 2.09 | -- | 1.5 | -- | 0.606 | 0.728 | -- | 53.76 | 1451 | -- | -- |
| 288.04 | 0.796 | 9.47 | 2.09 | 0.553 | -- | 0.31 | -- | 0.663 | 21.3 | -- | -- | -- | -- |
| 288.35 | 0.795 | 9.47 | 2.08 | 0.55 | -- | -- | -- | 0.662 | 21.5 | -- | -- | -- | -- |
| 245.38 | 0.73 | 9.44 | 2.15 | -- | 1.53 | -- | -- | 0.734 | -- | 53 | 1455 | -- | -- |
| 343.11 | 0.863 | 9.47 | -- | 0.565 | 2.12 | -- | -- | 0.694 | 22.2 | 77.63 | 1419 | -- | -- |
| 306.13 | 0.818 | 9.46 | 2.08 | -- | -- | -- | -- | 0.66 | -- | -- | -- | -- | -- |
| 402.34 | 0.938 | 9.52 | -- | 0.554 | -- | -- | -- | 0.43 | 21.7 | -- | -- | -- | -- |
| 359.87 | 0.884 | 9.45 | -- | -- | 2.18 | -- | -- | 0.678 | -- | 76.68 | 1467 | -- | -- |
| 420.6 | 0.957 | 9.51 | -- | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.77 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 3 | 222.18 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 4 | 222.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 5 | 222.69 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 6 | 222.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 10 | 222.91 | humidity | 50 | 1440 | > th | dose dependent | sin | 16 | NA |
| 39 | 223.55 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 58 | 223.97 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 73 | 224.13 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 80 | 224.19 | humidity | 50 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 104 | 224.40 | humidity | 90 | 1440 | < th | dose dependent | sin | 15 | NA |
| 128 | 224.68 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 173 | 225.14 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 175 | 225.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 192 | 225.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 202 | 225.38 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 235 | 225.52 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 282 | 225.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 284 | 225.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 288 | 225.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 295 | 225.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 346 | 226.09 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 397 | 226.27 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 400 | 226.28 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 467 | 226.54 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 512 | 226.83 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 515 | 226.86 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 525 | 226.96 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 537 | 227.03 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 561 | 227.09 | humidity | 80 | 1440 | > th | dose independent | sin | 21 | NA |
| 567 | 227.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 638 | 227.36 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 6 |
| 644 | 227.37 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 662 | 227.47 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 668 | 227.51 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 804 | 227.90 | humidity | 80 | 1440 | < th | dose independent | sin | 22 | NA |
| 821 | 227.95 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 862 | 228.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 896 | 228.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 946 | 228.41 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 960 | 228.47 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 998 | 228.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |