Os04g0430200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol-specific phospholipase C, X region domain containing protein.
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Os04g0430200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol-specific phospholipase C, X region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.17 | 0.708 | 9.15 | -1.65 | 4.21 | 2.02 | 0.874 | 1.79 | -0.207 | 8.57 | 94 | 774 | 18.4 | 3.05 |
| 233.74 | 0.712 | 9.17 | -1.79 | 4.23 | 2.06 | 0.576 | -- | -0.216 | 8.57 | 94.08 | 780 | 18.2 | 3.27 |
| 228.55 | 0.704 | 9.13 | -1.63 | 4.26 | 2.11 | -- | 1.59 | -0.176 | 8.61 | 94.29 | 781 | 18.1 | 3.25 |
| 232.57 | 0.71 | 9.14 | -1.81 | 4.35 | 2.22 | -- | -- | -0.199 | 8.63 | 94.67 | 794 | 17.6 | 3.91 |
| 611.39 | 1.15 | 9.13 | -1.5 | -- | 4.33 | -- | 1.49 | -0.0437 | -- | 114.1 | 1013 | 19.7 | 3.92 |
| 332.39 | 0.855 | 9.15 | -1.94 | 4.52 | -- | 1.43 | -- | -0.219 | 7.3 | -- | -- | -- | -- |
| 337.92 | 0.861 | 9.15 | -1.91 | 4.52 | -- | -- | -- | -0.222 | 7.31 | -- | -- | -- | -- |
| 328.62 | 0.844 | 9.26 | -1.7 | -- | 5.07 | -- | -- | -0.237 | -- | 171.6 | 705 | 21.6 | 7.64 |
| 317.96 | 0.83 | 9.12 | -- | 4.24 | 2.32 | -- | -- | -0.0527 | 8.8 | 94.96 | 801 | 17.9 | 4.17 |
| 1425.03 | 1.76 | 9.25 | -1.83 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 433.74 | 0.974 | 9.1 | -- | 4.51 | -- | -- | -- | -0.00929 | 7.34 | -- | -- | -- | -- |
| 418.06 | 0.952 | 9.23 | -- | -- | 5.34 | -- | -- | -0.049 | -- | 152.3 | 725 | 21.2 | 8.22 |
| 1513.28 | 1.82 | 9.21 | -- | -- | -- | -- | -- | 0.0572 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.71 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 13 | 242.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 19 | 243.83 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 45 | 247.79 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 54 | 249.19 | humidity | 80 | 720 | < th | dose independent | rect. | 18 | 3 |
| 76 | 251.04 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 81 | 251.47 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 84 | 251.60 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 119 | 253.40 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 149 | 255.20 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 169 | 255.56 | humidity | 90 | 720 | < th | dose independent | rect. | 17 | 7 |
| 224 | 257.80 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 265 | 259.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 278 | 259.76 | humidity | 90 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 289 | 259.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 326 | 260.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 354 | 261.40 | humidity | 50 | 1440 | > th | dose dependent | sin | 18 | NA |
| 386 | 261.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 410 | 261.97 | humidity | 90 | 1440 | < th | dose dependent | sin | 18 | NA |
| 416 | 262.02 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 421 | 262.14 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 446 | 262.44 | humidity | 80 | 1440 | > th | dose independent | sin | 23 | NA |
| 459 | 262.58 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 476 | 262.75 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 508 | 263.02 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 16 |
| 547 | 263.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 587 | 263.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 609 | 263.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 624 | 264.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 633 | 264.07 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 676 | 264.38 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 682 | 264.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 716 | 264.61 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 729 | 264.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 730 | 264.70 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 739 | 264.74 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 756 | 264.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 782 | 264.94 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 784 | 264.94 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 797 | 264.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 800 | 264.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 851 | 265.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 886 | 265.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 897 | 265.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 958 | 265.52 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |