Os04g0429900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0429900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.63 | 0.26 | 9.14 | -1.02 | 1.24 | 0.598 | -0.291 | -0.0853 | -0.431 | 5.08 | 19.16 | 5610 | -- | -- |
| 30.63 | 0.258 | 9.14 | -0.998 | 1.24 | 0.601 | -0.281 | -- | -0.426 | 5.08 | 18.94 | 5618 | -- | -- |
| 30.84 | 0.259 | 9.14 | -1.01 | 1.24 | 0.599 | -- | -0.0686 | -0.429 | 5.08 | 19.05 | 5609 | -- | -- |
| 30.84 | 0.259 | 9.14 | -1 | 1.24 | 0.604 | -- | -- | -0.424 | 5.08 | 18.76 | 5609 | -- | -- |
| 108.75 | 0.486 | 9.16 | -1.02 | -- | 0.866 | -- | -0.0129 | -0.438 | -- | 15.19 | 2722 | -- | -- |
| 40.05 | 0.297 | 9.1 | -0.69 | 1.26 | -- | -0.266 | -- | -0.276 | 5 | -- | -- | -- | -- |
| 40.23 | 0.297 | 9.1 | -0.689 | 1.26 | -- | -- | -- | -0.275 | 5.01 | -- | -- | -- | -- |
| 108.71 | 0.486 | 9.16 | -0.993 | -- | 0.863 | -- | -- | -0.421 | -- | 14.3 | 2719 | -- | -- |
| 49.74 | 0.328 | 9.1 | -- | 1.25 | 0.204 | -- | -- | -0.206 | 5.09 | 27.75 | 5445 | -- | -- |
| 124.08 | 0.52 | 9.12 | -0.643 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 52.75 | 0.34 | 9.09 | -- | 1.25 | -- | -- | -- | -0.198 | 5.02 | -- | -- | -- | -- |
| 118.88 | 0.509 | 9.08 | -- | -- | -0.79 | -- | -- | -0.089 | -- | 23.7 | 2723 | -- | -- |
| 135 | 0.542 | 9.1 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 2 | 29.81 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 3 | 29.81 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 16 | 30.27 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 33 | 30.54 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 41 | 30.62 | temperature | 20.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 42 | 30.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 43 | 30.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 44 | 30.63 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 46 | 30.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 49 | 30.65 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 50 | 30.66 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 51 | 30.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 53 | 30.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 59 | 30.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 69 | 30.72 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 72 | 30.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 84 | 30.74 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 88 | 30.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 99 | 30.76 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 125 | 30.79 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 126 | 30.79 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 127 | 30.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 142 | 30.80 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 218 | 30.85 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 263 | 30.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 264 | 30.87 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 268 | 30.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 285 | 30.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 287 | 30.88 | temperature | 20.0 | 4320 | > th | dose dependent | no | NA | NA |
| 288 | 30.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 302 | 30.88 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 22 |
| 338 | 30.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 401 | 30.92 | temperature | 30.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 419 | 30.92 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 13 | 19 |
| 443 | 30.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 462 | 30.94 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 487 | 30.94 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 546 | 30.96 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 772 | 31.02 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 776 | 31.02 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 927 | 31.05 | temperature | 10.0 | 4320 | > th | dose dependent | no | NA | NA |