Os04g0421800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os04g0421800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.02 | 0.176 | 10.8 | 0.413 | 0.0193 | 0.807 | 0.382 | 0.579 | 0.073 | 23.5 | 17.1 | 11 | -- | -- |
| 14.25 | 0.176 | 10.8 | 0.329 | 0.00434 | 0.805 | 0.267 | -- | 0.0492 | 21.9 | 17.2 | 18 | -- | -- |
| 14.48 | 0.179 | 10.8 | 0.342 | 0.0241 | 0.819 | -- | 0.209 | 0.0559 | 1.31 | 17.1 | 11 | -- | -- |
| 14.5 | 0.177 | 10.8 | 0.307 | 0.0257 | 0.813 | -- | -- | 0.0435 | 2.4 | 17.5 | 12 | -- | -- |
| 14.49 | 0.177 | 10.8 | 0.339 | -- | 0.793 | -- | 0.171 | 0.057 | -- | 17.2 | 12 | -- | -- |
| 22.85 | 0.224 | 10.8 | 0.483 | 0.247 | -- | -0.0177 | -- | 0.177 | 14.4 | -- | -- | -- | -- |
| 22.85 | 0.224 | 10.8 | 0.483 | 0.247 | -- | -- | -- | 0.177 | 14.4 | -- | -- | -- | -- |
| 14.52 | 0.177 | 10.8 | 0.314 | -- | 0.788 | -- | -- | 0.0498 | -- | 17.5 | 12 | -- | -- |
| 16.73 | 0.19 | 10.8 | -- | 0.0702 | 0.954 | -- | -- | -0.00668 | 2.35 | 17.2 | 18 | -- | -- |
| 26.45 | 0.24 | 10.8 | 0.472 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 28.99 | 0.252 | 10.8 | -- | 0.238 | -- | -- | -- | 0.124 | 14.4 | -- | -- | -- | -- |
| 16.94 | 0.192 | 10.8 | -- | -- | 0.889 | -- | -- | 0.00383 | -- | 17.1 | 18 | -- | -- |
| 32.33 | 0.265 | 10.8 | -- | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 13.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 12 | 13.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 15 | 13.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 19 | 14.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 20 | 14.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 21 | 14.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 26 | 14.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 35 | 14.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 50 | 14.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 73 | 14.09 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 132 | 14.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 133 | 14.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 167 | 14.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 170 | 14.17 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 187 | 14.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 215 | 14.20 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 233 | 14.21 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 268 | 14.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 389 | 14.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 669 | 14.44 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 731 | 14.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 831 | 14.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 835 | 14.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 882 | 14.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |