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Os04g0420600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.94 (0.0292) R2 : 0.569
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.47 (0.0884) R2dC : 0.408 R2C : -0.303
β3 : 2.09 (0.0863) R2dE : 0.871 R2E : 0.161
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0252 (0.0617) R2dN8 : -0.000269 R2N8 : 0.00103
σ : 0.549
deviance : 138.8
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_____
C
peak time of C : 1.7
E
wheather : radiation
threshold : 0.4
memory length : 92
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 23.2
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
131.44 0.539 5.93 0.356 1.41 2.11 1.01 -0.196 0.018 1.76 0.4697 104 23.6 --
131.36 0.534 5.93 0.359 1.42 2.1 1.13 -- 0.0264 1.73 0.409 104 23.4 --
132.99 0.537 5.94 0.326 1.45 2.07 -- -0.882 0.0201 1.74 0.41 92 23.2 --
135.86 0.543 5.93 0.33 1.45 2.1 -- -- 0.0302 1.68 0.41 92 23.2 --
183.22 0.63 5.92 0.43 -- 1.86 -- -0.726 0.00109 -- 0.4076 89 2.11 --
193.35 0.652 5.86 0.335 1.53 -- -0.471 -- 0.132 7.03 -- -- -- --
193.91 0.652 5.86 0.325 1.53 -- -- -- 0.133 6.99 -- -- -- --
184.05 0.632 5.93 0.365 -- 1.84 -- -- 0.0341 -- 0.46 85 2.06 --
138.8 0.549 5.94 -- 1.47 2.09 -- -- 0.0252 1.7 0.4 92 23.2 --
317.3 0.832 5.89 0.357 -- -- -- -- 0.162 -- -- -- -- --
196.7 0.656 5.87 -- 1.54 -- -- -- 0.097 6.97 -- -- -- --
187.14 0.637 5.92 -- -- 1.82 -- -- 0.0196 -- 0.4031 79 1.94 --
320.65 0.836 5.9 -- -- -- -- -- 0.122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 128.50 radiation 20.0 270 < th dose dependent rect. 4 20
2 129.11 humidity 80.0 90 > th dose dependent rect. 1 4
10 131.15 humidity 60.0 270 > th dose dependent rect. 23 5
21 132.52 radiation 1.0 90 < th dose dependent rect. 1 6
24 132.60 humidity 80.0 10 > th dose dependent rect. 24 6
26 132.69 humidity 70.0 270 > th dose dependent rect. 1 1
27 132.77 radiation 1.0 90 < th dose independent rect. 1 5
29 133.00 radiation 1.0 90 < th dose dependent rect. 1 9
35 133.35 radiation 1.0 90 < th dose dependent sin 5 NA
46 134.11 radiation 1.0 90 < th dose independent rect. 1 9
51 134.23 radiation 1.0 90 > th dose independent sin 6 NA
59 134.68 humidity 80.0 90 > th dose independent rect. 1 4
68 135.34 radiation 1.0 90 < th dose independent sin 6 NA
71 135.54 radiation 10.0 270 < th dose independent rect. 4 20
83 136.20 atmosphere 1015.0 90 < th dose dependent rect. 1 4
92 136.68 temperature 10.0 90 > th dose independent rect. 1 4
94 136.68 temperature 30.0 90 < th dose independent rect. 1 4
95 136.68 humidity 50.0 90 > th dose independent rect. 1 4
98 136.68 atmosphere 995.0 90 > th dose independent rect. 1 4
99 136.68 atmosphere 1010.0 90 < th dose independent rect. 1 4
101 136.68 radiation 20.0 90 < th dose independent rect. 1 4
104 136.68 temperature 10.0 90 > th dose independent rect. 5 20
105 136.68 radiation 40.0 90 < th dose dependent rect. 1 4
106 136.69 wind 9.0 90 < th dose independent rect. 1 4
107 136.69 radiation 20.0 90 < th dose dependent rect. 1 4
113 136.73 precipitation 0.1 90 < th dose independent rect. 1 4
114 136.73 precipitation 0.1 90 < th dose dependent rect. 1 4
120 136.97 humidity 80.0 270 > th dose independent rect. 1 1
124 137.09 wind 9.0 90 < th dose dependent rect. 1 4
138 137.37 temperature 10.0 270 > th dose independent rect. 3 21
150 137.46 humidity 80.0 270 > th dose independent rect. 23 5
159 137.77 temperature 10.0 270 > th dose independent rect. 23 5
160 137.77 temperature 30.0 270 < th dose independent rect. 23 5
161 137.77 humidity 50.0 270 > th dose independent rect. 23 5
164 137.77 atmosphere 995.0 270 > th dose independent rect. 23 5
165 137.77 radiation 1.0 270 < th dose independent rect. 23 5
171 137.77 atmosphere 995.0 90 > th dose independent rect. 5 20
172 137.77 radiation 1.0 270 < th dose dependent rect. 23 5
177 137.78 wind 9.0 270 < th dose independent rect. 23 5
183 137.98 wind 9.0 270 < th dose dependent rect. 23 5
185 138.00 precipitation 0.1 270 < th dose independent rect. 23 5
186 138.00 precipitation 0.1 270 < th dose dependent rect. 23 5
191 138.13 atmosphere 1015.0 270 < th dose independent rect. 23 5
193 138.15 humidity 70.0 270 > th dose independent rect. 3 21
196 138.18 humidity 70.0 270 > th dose independent rect. 4 19
203 138.46 wind 9.0 90 < th dose independent rect. 5 20
205 138.52 humidity 50.0 90 > th dose independent rect. 5 20
209 138.68 humidity 50.0 90 > th dose dependent rect. 5 20
217 138.96 temperature 10.0 90 > th dose dependent rect. 12 17
221 139.00 wind 9.0 270 < th dose dependent rect. 1 1
237 139.29 radiation 40.0 270 < th dose dependent rect. 15 8
239 139.33 humidity 80.0 10 > th dose independent rect. 1 5
240 139.35 wind 9.0 270 < th dose independent rect. 3 21
243 139.45 precipitation 0.1 270 < th dose independent rect. 1 1
244 139.45 precipitation 0.1 270 < th dose dependent rect. 1 1
247 139.52 temperature 10.0 270 > th dose independent rect. 1 1
249 139.52 temperature 30.0 270 < th dose independent rect. 1 1
250 139.52 humidity 50.0 270 > th dose independent rect. 1 1
253 139.52 atmosphere 995.0 270 > th dose independent rect. 1 1
254 139.52 atmosphere 1010.0 270 < th dose independent rect. 1 1
256 139.52 radiation 1.0 270 < th dose independent rect. 1 1
261 139.52 temperature 10.0 270 > th dose independent rect. 2 23
262 139.52 radiation 1.0 270 < th dose dependent rect. 1 1
269 139.55 wind 9.0 270 < th dose independent rect. 1 1
277 139.79 precipitation 0.1 90 < th dose independent rect. 5 20
278 139.79 precipitation 0.1 90 < th dose dependent rect. 5 20
300 140.23 temperature 10.0 90 > th dose dependent rect. 1 4
301 140.26 precipitation 0.1 90 < th dose independent rect. 12 17
302 140.26 precipitation 0.1 90 < th dose dependent rect. 12 17
306 140.34 radiation 20.0 270 < th dose independent rect. 15 9
311 140.42 atmosphere 995.0 270 > th dose independent rect. 3 21
314 140.45 atmosphere 1015.0 270 < th dose dependent rect. 23 5
321 140.77 precipitation 0.1 270 < th dose independent rect. 3 21
322 140.77 precipitation 0.1 270 < th dose dependent rect. 3 21
324 140.82 wind 1.0 270 > th dose independent rect. 24 3
340 141.02 humidity 50.0 270 > th dose independent rect. 3 21
347 141.09 precipitation 0.1 90 < th dose independent rect. 5 7
348 141.09 precipitation 0.1 90 < th dose dependent rect. 5 7
349 141.11 temperature 10.0 90 > th dose independent rect. 5 7
350 141.11 atmosphere 995.0 90 > th dose independent rect. 5 7
351 141.11 atmosphere 1015.0 90 < th dose independent rect. 5 7
352 141.11 temperature 10.0 90 > th dose independent rect. 12 17
360 141.24 temperature 10.0 270 > th dose dependent rect. 1 1
417 141.83 wind 9.0 90 < th dose independent rect. 5 7
427 141.98 wind 9.0 90 < th dose independent rect. 12 17
430 142.00 temperature 10.0 270 > th dose independent rect. 3 9
431 142.00 atmosphere 995.0 270 > th dose independent rect. 3 9
432 142.00 atmosphere 1015.0 270 < th dose independent rect. 3 9
435 142.02 radiation 1.0 90 > th dose independent rect. 4 8
449 142.08 wind 9.0 10 < th dose dependent rect. 1 5
456 142.18 humidity 50.0 90 > th dose independent rect. 5 7
489 142.45 wind 9.0 10 < th dose independent rect. 1 5
490 142.45 temperature 10.0 10 > th dose independent rect. 1 5
492 142.45 temperature 30.0 10 < th dose independent rect. 1 5
493 142.45 humidity 50.0 10 > th dose independent rect. 1 5
496 142.45 atmosphere 995.0 10 > th dose independent rect. 1 5
497 142.45 atmosphere 1010.0 10 < th dose independent rect. 1 5
499 142.45 radiation 20.0 10 < th dose independent rect. 1 5
504 142.45 temperature 10.0 10 > th dose independent rect. 6 19
509 142.47 humidity 50.0 270 > th dose independent rect. 3 9
562 142.64 precipitation 0.1 270 < th dose independent rect. 3 9
563 142.64 precipitation 0.1 270 < th dose dependent rect. 3 9
568 142.68 wind 9.0 270 < th dose independent rect. 3 9
584 142.90 radiation 1.0 270 > th dose independent rect. 9 9
589 142.93 radiation 40.0 90 < th dose independent rect. 5 8
592 142.96 atmosphere 995.0 10 > th dose independent rect. 6 19
597 142.99 temperature 30.0 90 < th dose independent rect. 5 20
613 143.10 temperature 10.0 270 > th dose dependent rect. 23 5
631 143.36 wind 1.0 90 > th dose independent rect. 5 20
670 143.57 precipitation 0.1 10 < th dose independent rect. 1 5
671 143.57 precipitation 0.1 10 < th dose dependent rect. 1 5
682 143.66 atmosphere 1015.0 90 < th dose independent rect. 12 17
686 143.69 precipitation 0.1 10 < th dose independent rect. 6 19
689 143.69 precipitation 0.1 10 < th dose dependent rect. 6 19
747 143.87 atmosphere 1015.0 90 < th dose independent rect. 5 20
760 143.95 radiation 1.0 270 < th dose independent rect. 7 16
769 144.01 radiation 1.0 90 < th dose dependent rect. 10 15
776 144.04 temperature 15.0 270 > th dose independent rect. 24 15
777 144.05 radiation 1.0 90 < th dose independent rect. 10 15
802 144.10 radiation 1.0 90 < th dose dependent rect. 13 12
803 144.11 wind 9.0 1440 < th dose independent rect. 2 5
804 144.11 temperature 10.0 1440 > th dose independent rect. 2 5
807 144.11 temperature 30.0 1440 < th dose independent rect. 2 5
811 144.11 humidity 50.0 1440 > th dose independent rect. 2 5
816 144.11 atmosphere 995.0 1440 > th dose independent rect. 2 5
817 144.11 radiation 40.0 1440 < th dose independent rect. 2 5
822 144.11 temperature 10.0 1440 > th dose independent rect. 7 19
829 144.15 radiation 1.0 90 < th dose independent rect. 13 12
884 144.40 radiation 1.0 90 < th dose independent rect. 15 10
892 144.45 radiation 40.0 270 < th dose dependent rect. 11 12
903 144.52 temperature 10.0 10 > th dose dependent rect. 1 5
933 144.77 temperature 10.0 270 > th dose dependent rect. 10 18
953 144.86 atmosphere 1015.0 10 < th dose dependent rect. 1 5
956 144.88 wind 9.0 10 < th dose independent rect. 6 19
958 144.90 radiation 40.0 270 < th dose dependent rect. 4 8
1000 145.18 humidity 90.0 270 < th dose independent rect. 9 9