Os04g0417000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aluminum-activated malate transporter.
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Os04g0417000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aluminum-activated malate transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.57 | 0.526 | 2.74 | 0.411 | 0.073 | -0.412 | -0.0147 | 6.49 | 0.0442 | 12.3 | 1.753e-06 | 100 | -- | -- |
| 136.36 | 0.544 | 2.78 | 0.256 | 0.08 | 0.548 | -0.152 | -- | 0.0568 | 12.4 | 0.3 | 97 | -- | -- |
| 125.53 | 0.522 | 2.74 | 0.411 | 0.0736 | -0.416 | -- | 6.55 | 0.0435 | 12.2 | 0.1442 | 98 | -- | -- |
| 136.46 | 0.544 | 2.78 | 0.236 | 0.0849 | 0.594 | -- | -- | 0.054 | 14 | 0.2614 | 97 | -- | -- |
| 125.83 | 0.522 | 2.74 | 0.41 | -- | -0.439 | -- | 6.55 | 0.0419 | -- | 0.1366 | 97 | -- | -- |
| 138.36 | 0.551 | 2.79 | 0.295 | 0.0233 | -- | 0.635 | -- | 0.0278 | 4.79 | -- | -- | -- | -- |
| 139.16 | 0.552 | 2.79 | 0.293 | 0.0719 | -- | -- | -- | 0.0249 | 9.07 | -- | -- | -- | -- |
| 136.86 | 0.545 | 2.78 | 0.229 | -- | 0.542 | -- | -- | 0.0484 | -- | 0.1003 | 97 | -- | -- |
| 137.87 | 0.547 | 2.79 | -- | 0.0866 | 0.666 | -- | -- | 0.0324 | 14.1 | 0.1869 | 97 | -- | -- |
| 139.45 | 0.552 | 2.79 | 0.293 | -- | -- | -- | -- | 0.0253 | -- | -- | -- | -- | -- |
| 141.42 | 0.556 | 2.79 | -- | 0.0725 | -- | -- | -- | -0.00773 | 8.76 | -- | -- | -- | -- |
| 138.29 | 0.548 | 2.79 | -- | -- | 0.608 | -- | -- | 0.0271 | -- | 0.092 | 97 | -- | -- |
| 141.72 | 0.556 | 2.79 | -- | -- | -- | -- | -- | -0.00717 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.98 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 111.88 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 16 | 124.06 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 22 | 124.96 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 32 | 126.44 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 61 | 128.07 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 69 | 128.22 | wind | 1.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 70 | 128.25 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 72 | 128.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 73 | 128.36 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 102 | 128.62 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 112 | 128.62 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 129 | 128.93 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 133 | 128.96 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 136 | 128.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 140 | 129.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 141 | 129.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 175 | 129.38 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 184 | 129.50 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 201 | 129.70 | radiation | 1.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 229 | 130.19 | wind | 7.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 230 | 130.19 | radiation | 40.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 231 | 130.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 232 | 130.19 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 233 | 130.19 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 238 | 130.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 252 | 130.36 | wind | 7.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 258 | 130.40 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 265 | 130.41 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 279 | 130.46 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 336 | 130.66 | atmosphere | 1010.0 | 30 | > th | dose dependent | rect. | 10 | 3 |
| 349 | 130.67 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 365 | 130.68 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 645 | 130.85 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 658 | 130.90 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 681 | 130.94 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 683 | 130.98 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 685 | 130.98 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 694 | 131.07 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 821 | 131.17 | humidity | 60.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 836 | 131.20 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 850 | 131.30 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 856 | 131.32 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 16 |
| 864 | 131.37 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 882 | 131.38 | humidity | 60.0 | 90 | < th | dose independent | rect. | 11 | 3 |
| 883 | 131.38 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 895 | 131.43 | temperature | 20.0 | 30 | < th | dose independent | sin | 4 | NA |
| 901 | 131.44 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 909 | 131.49 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 918 | 131.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 919 | 131.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 927 | 131.57 | wind | 1.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 942 | 131.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 949 | 131.66 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 958 | 131.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 973 | 131.71 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 975 | 131.72 | wind | 1.0 | 720 | < th | dose independent | rect. | 7 | 1 |
| 994 | 131.78 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 999 | 131.79 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 9 |