Os04g0415100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0415100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF623, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.86 | 0.42 | 2.96 | -0.516 | 0.00608 | 0.679 | -0.552 | -6.43 | 0.0541 | 18.1 | 30.78 | 26 | -- | -- |
| 83.51 | 0.426 | 2.92 | -0.105 | 0.0277 | -0.144 | -0.505 | -- | 0.0435 | 18 | 32.2 | 70 | -- | -- |
| 80.3 | 0.421 | 2.95 | -0.492 | 0.0699 | 0.646 | -- | -6.51 | 0.0505 | 12.6 | 30.78 | 26 | -- | -- |
| 83.75 | 0.426 | 2.92 | -0.0956 | 0.0913 | -0.182 | -- | -- | 0.0403 | 13.6 | 31.7 | 68 | -- | -- |
| 80.59 | 0.42 | 2.96 | -0.498 | -- | 0.671 | -- | -6.53 | 0.0509 | -- | 30.78 | 26 | -- | -- |
| 83.71 | 0.429 | 2.91 | -0.111 | 0.0113 | -- | -0.573 | -- | 0.049 | 17.8 | -- | -- | -- | -- |
| 84.17 | 0.43 | 2.91 | -0.106 | 0.0747 | -- | -- | -- | 0.0475 | 12.1 | -- | -- | -- | -- |
| 84.19 | 0.427 | 2.92 | -0.0984 | -- | -0.141 | -- | -- | 0.0396 | -- | 32.08 | 79 | -- | -- |
| 83.94 | 0.427 | 2.91 | -- | 0.0926 | -0.185 | -- | -- | 0.0497 | 13.3 | 32.01 | 76 | -- | -- |
| 84.52 | 0.43 | 2.92 | -0.108 | -- | -- | -- | -- | 0.0464 | -- | -- | -- | -- | -- |
| 84.46 | 0.43 | 2.91 | -- | 0.0761 | -- | -- | -- | 0.0593 | 12.2 | -- | -- | -- | -- |
| 84.45 | 0.428 | 2.92 | -- | -- | -0.151 | -- | -- | 0.0499 | -- | 32.09 | 79 | -- | -- |
| 84.83 | 0.43 | 2.91 | -- | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.17 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 78.17 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 78.35 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 17 |
| 11 | 78.36 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 42 | 78.67 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 17 |
| 43 | 78.68 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 9 |
| 71 | 78.90 | wind | 9 | 90 | < th | dose independent | sin | 12 | NA |
| 75 | 79.12 | wind | 9 | 90 | > th | dose independent | sin | 12 | NA |
| 79 | 79.38 | wind | 9 | 90 | > th | dose dependent | sin | 12 | NA |
| 84 | 79.73 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 6 |
| 149 | 79.87 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 5 |
| 201 | 79.88 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 204 | 79.90 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 249 | 80.08 | temperature | 30 | 90 | > th | dose independent | rect. | 18 | 18 |
| 305 | 80.16 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 20 | 1 |
| 306 | 80.16 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 21 | 2 |
| 364 | 80.20 | wind | 1 | 270 | < th | dose independent | rect. | 19 | 1 |
| 374 | 80.20 | wind | 1 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 380 | 80.21 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 22 | 1 |
| 381 | 80.21 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 22 | 2 |
| 535 | 80.32 | atmosphere | 1000 | 10 | > th | dose independent | sin | 12 | NA |
| 567 | 80.35 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 1 |
| 727 | 80.45 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 746 | 80.46 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 799 | 80.52 | atmosphere | 1000 | 10 | < th | dose independent | sin | 11 | NA |
| 877 | 80.56 | radiation | 20 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 907 | 80.58 | radiation | 1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 920 | 80.60 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 944 | 80.62 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 961 | 80.64 | temperature | 25 | 90 | < th | dose independent | rect. | 16 | 1 |
| 973 | 80.65 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 6 | 4 |
| 976 | 80.65 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 1000 | 80.68 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 1 |