Os04g0413500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell wall invertase 2.
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Os04g0413500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell wall invertase 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.97 | 0.659 | 3.04 | 0.156 | 0.298 | 2.6 | -0.626 | 4.21 | 0.0568 | 6.23 | 8.32 | 10 | -- | -- |
| 198.33 | 0.656 | 3.02 | 0.154 | 0.304 | 1.65 | -0.587 | -- | 0.0589 | 5.94 | 8.335 | 10 | -- | -- |
| 197.89 | 0.655 | 3.04 | 0.142 | 0.291 | 2.54 | -- | 4.39 | 0.0571 | 6.34 | 8.298 | 10 | -- | -- |
| 199.29 | 0.657 | 3.02 | 0.125 | 0.297 | 1.46 | -- | -- | 0.0621 | 6.4 | 8.2 | 10 | -- | -- |
| 202.23 | 0.662 | 3.05 | 0.141 | -- | 2.45 | -- | 4.61 | 0.0584 | -- | 8.3 | 10 | -- | -- |
| 205.34 | 0.672 | 3.03 | 0.0333 | 0.257 | -- | -0.337 | -- | 0.0222 | 6.96 | -- | -- | -- | -- |
| 205.63 | 0.672 | 3.03 | 0.0274 | 0.256 | -- | -- | -- | 0.0232 | 7.09 | -- | -- | -- | -- |
| 203.8 | 0.665 | 3.03 | 0.119 | -- | 1.32 | -- | -- | 0.0643 | -- | 8.212 | 10 | -- | -- |
| 199.68 | 0.658 | 3.03 | -- | 0.296 | 1.39 | -- | -- | 0.0472 | 6.42 | 8.2 | 10 | -- | -- |
| 209.08 | 0.676 | 3.04 | 0.0323 | -- | -- | -- | -- | 0.0278 | -- | -- | -- | -- | -- |
| 205.65 | 0.671 | 3.03 | -- | 0.256 | -- | -- | -- | 0.0202 | 7.08 | -- | -- | -- | -- |
| 204.17 | 0.666 | 3.03 | -- | -- | 1.24 | -- | -- | 0.0486 | -- | 8.2 | 10 | -- | -- |
| 209.11 | 0.675 | 3.04 | -- | -- | -- | -- | -- | 0.0242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.33 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 2 | 192.47 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 2 |
| 42 | 192.98 | wind | 9 | 90 | > th | dose independent | rect. | 16 | 19 |
| 44 | 193.01 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 1 |
| 106 | 193.85 | wind | 9 | 10 | > th | dose dependent | sin | 15 | NA |
| 128 | 194.42 | wind | 9 | 10 | > th | dose dependent | sin | 11 | NA |
| 130 | 194.44 | temperature | 20 | 270 | < th | dose dependent | rect. | 2 | 2 |
| 149 | 194.68 | temperature | 20 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 197 | 195.41 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 21 |
| 212 | 195.57 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 5 | 2 |
| 213 | 195.57 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 229 | 195.72 | temperature | 20 | 90 | < th | dose dependent | rect. | 2 | 7 |
| 259 | 195.98 | temperature | 20 | 270 | < th | dose independent | rect. | 2 | 2 |
| 262 | 196.20 | wind | 9 | 90 | > th | dose independent | sin | 16 | NA |
| 263 | 196.22 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 275 | 196.35 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 22 |
| 286 | 196.43 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 3 |
| 329 | 196.58 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 4 |
| 342 | 196.68 | wind | 9 | 90 | < th | dose independent | sin | 18 | NA |
| 365 | 196.85 | wind | 9 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 368 | 196.92 | wind | 9 | 90 | > th | dose independent | sin | 11 | NA |
| 414 | 197.11 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 6 |
| 418 | 197.14 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 3 |
| 459 | 197.31 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 466 | 197.31 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 478 | 197.33 | humidity | 90 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 482 | 197.37 | wind | 9 | 10 | < th | dose independent | sin | 17 | NA |
| 523 | 197.58 | wind | 9 | 90 | > th | dose independent | rect. | 10 | 9 |
| 626 | 197.80 | wind | 9 | 90 | > th | dose dependent | rect. | 10 | 9 |
| 747 | 197.94 | wind | 9 | 90 | > th | dose independent | no | NA | NA |
| 870 | 198.02 | wind | 9 | 10 | > th | dose dependent | no | NA | NA |
| 985 | 198.08 | wind | 9 | 10 | > th | dose independent | sin | 17 | NA |
| 986 | 198.08 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 5 |