Os04g0413200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell wall invertase (EC 3.2.1.26).
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Os04g0413200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell wall invertase (EC 3.2.1.26).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.73 | 0.857 | 3.54 | 0.284 | 0.376 | 4.08 | 0.489 | 6.5 | -0.149 | 12.6 | 19.01 | 14 | -- | -- |
| 338.26 | 0.863 | 3.49 | 0.296 | 0.394 | 1.15 | 0.302 | -- | -0.109 | 12.5 | 21.09 | 72 | -- | -- |
| 332.58 | 0.856 | 3.54 | 0.324 | 0.352 | 4.83 | -- | 7.92 | -0.154 | 12.5 | 18.7 | 4 | -- | -- |
| 338.56 | 0.863 | 3.49 | 0.314 | 0.387 | 1.22 | -- | -- | -0.111 | 12.5 | 20.75 | 11 | -- | -- |
| 340.21 | 0.864 | 3.55 | 0.295 | -- | 4.41 | -- | 7.2 | -0.163 | -- | 18.7 | 4 | -- | -- |
| 349.37 | 0.876 | 3.51 | 0.0991 | 0.286 | -- | 0.371 | -- | -0.206 | 12.3 | -- | -- | -- | -- |
| 349.96 | 0.876 | 3.51 | 0.114 | 0.285 | -- | -- | -- | -0.204 | 12.2 | -- | -- | -- | -- |
| 346.73 | 0.871 | 3.5 | 0.279 | -- | 1.25 | -- | -- | -0.147 | -- | 19.5 | 11 | -- | -- |
| 340.92 | 0.865 | 3.5 | -- | 0.371 | 1.05 | -- | -- | -0.154 | 12.4 | 20.84 | 11 | -- | -- |
| 355.07 | 0.88 | 3.51 | 0.104 | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
| 350.3 | 0.876 | 3.51 | -- | 0.283 | -- | -- | -- | -0.217 | 12.2 | -- | -- | -- | -- |
| 348.5 | 0.872 | 3.51 | -- | -- | 1.16 | -- | -- | -0.188 | -- | 19.1 | 6 | -- | -- |
| 355.36 | 0.88 | 3.52 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 331.59 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 3 | 331.74 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 4 | 331.90 | temperature | 20 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 16 | 332.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 17 | 333.05 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 51 | 334.10 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 85 | 334.36 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 118 | 334.50 | temperature | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 142 | 334.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 176 | 334.77 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 1 |
| 180 | 334.79 | temperature | 20 | 10 | < th | dose dependent | sin | 5 | NA |
| 197 | 334.84 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 202 | 334.84 | temperature | 20 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 260 | 335.02 | temperature | 20 | 10 | < th | dose dependent | rect. | 11 | 22 |
| 262 | 335.03 | temperature | 20 | 10 | < th | dose dependent | no | NA | NA |
| 265 | 335.03 | temperature | 20 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 271 | 335.04 | temperature | 20 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 275 | 335.05 | temperature | 20 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 276 | 335.06 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 284 | 335.07 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 289 | 335.07 | temperature | 20 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 391 | 335.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 474 | 335.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 21 |
| 498 | 335.49 | radiation | 1 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 503 | 335.49 | temperature | 20 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 541 | 335.57 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 555 | 335.61 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 562 | 335.63 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 1 |
| 621 | 335.73 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 641 | 335.75 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 646 | 335.76 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 677 | 335.82 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 720 | 335.82 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 763 | 335.83 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 774 | 335.84 | temperature | 30 | 30 | > th | dose dependent | rect. | 14 | 3 |
| 809 | 335.89 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 861 | 335.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 874 | 335.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 19 |
| 879 | 336.00 | radiation | 1 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 891 | 336.01 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 21 |
| 917 | 336.03 | radiation | 1 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 957 | 336.06 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 4 |