Os04g0412300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os04g0412300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.03 | 0.598 | 8.06 | 1.15 | 1.98 | -0.753 | -0.565 | 8.23 | 0.288 | 4.56 | 1005 | 23 | -- | -- |
| 180.98 | 0.631 | 8.1 | 0.895 | 1.99 | 0.406 | -0.717 | -- | 0.37 | 4.49 | 1005 | 23 | -- | -- |
| 162.85 | 0.594 | 8.06 | 1.17 | 1.97 | -0.778 | -- | 8.43 | 0.293 | 4.58 | 1005 | 23 | -- | -- |
| 177.54 | 0.621 | 8.1 | 0.843 | 1.99 | 0.823 | -- | -- | 0.377 | 4.56 | 1002 | 176 | -- | -- |
| 369.28 | 0.895 | 8.07 | 1.28 | -- | -1.05 | -- | 8.77 | 0.322 | -- | 1005 | 69 | -- | -- |
| 183.61 | 0.635 | 8.11 | 0.929 | 1.98 | -- | -0.728 | -- | 0.334 | 4.5 | -- | -- | -- | -- |
| 185.02 | 0.637 | 8.11 | 0.934 | 1.98 | -- | -- | -- | 0.338 | 4.53 | -- | -- | -- | -- |
| 386.39 | 0.916 | 8.11 | 0.926 | -- | 0.861 | -- | -- | 0.43 | -- | 1001 | 1083 | -- | -- |
| 196.1 | 0.652 | 8.12 | -- | 2.01 | 1.03 | -- | -- | 0.291 | 4.52 | 1002 | 176 | -- | -- |
| 394.39 | 0.928 | 8.12 | 1.01 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 208.02 | 0.675 | 8.13 | -- | 2 | -- | -- | -- | 0.234 | 4.52 | -- | -- | -- | -- |
| 408.35 | 0.941 | 8.14 | -- | -- | 1.13 | -- | -- | 0.333 | -- | 1001 | 1062 | -- | -- |
| 421.35 | 0.958 | 8.15 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.91 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 2 | 150.97 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 15 | 150.99 | radiation | 10 | 43200 | > th | dose independent | sin | 8 | NA |
| 19 | 151.14 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 22 | 151.18 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 23 | 151.20 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 266 | 152.70 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 297 | 152.79 | radiation | 20 | 43200 | > th | dose independent | no | NA | NA |
| 380 | 153.03 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 381 | 153.03 | radiation | 20 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 384 | 153.05 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 386 | 153.08 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 389 | 153.10 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 444 | 153.25 | radiation | 30 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 544 | 153.89 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 553 | 153.98 | radiation | 10 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 666 | 154.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 674 | 154.21 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 680 | 154.32 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 688 | 154.39 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 701 | 154.47 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 707 | 154.54 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 714 | 154.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 717 | 154.60 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 723 | 154.62 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 743 | 154.69 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 744 | 154.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 747 | 154.72 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 748 | 154.72 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 766 | 154.73 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 767 | 154.73 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 22 |
| 772 | 154.77 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 789 | 154.78 | radiation | 40 | 43200 | > th | dose independent | sin | 17 | NA |
| 791 | 154.78 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 799 | 154.80 | radiation | 1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 866 | 154.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 909 | 155.01 | radiation | 20 | 43200 | < th | dose dependent | sin | 1 | NA |