Os04g0411800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Esterase/lipase/thioesterase domain containing protein.
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Os04g0411800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.32 | 0.365 | 11.4 | 0.135 | 1.39 | 0.919 | 0.599 | -0.403 | -0.162 | 2.49 | 26.29 | 828 | -- | -- |
| 60.46 | 0.362 | 11.4 | 0.236 | 1.4 | 0.889 | 0.573 | -- | -0.129 | 2.52 | 26.22 | 810 | -- | -- |
| 61.58 | 0.365 | 11.4 | 0.145 | 1.39 | 0.917 | -- | -0.276 | -0.16 | 2.51 | 26.27 | 825 | -- | -- |
| 61.64 | 0.366 | 11.4 | 0.219 | 1.41 | 0.895 | -- | -- | -0.134 | 2.52 | 26.21 | 810 | -- | -- |
| 151.89 | 0.574 | 11.4 | -0.135 | -- | 1.54 | -- | -0.829 | -0.425 | -- | 25.5 | 996 | -- | -- |
| 82.88 | 0.427 | 11.3 | 0.521 | 1.52 | -- | 0.642 | -- | 0.121 | 1.52 | -- | -- | -- | -- |
| 84.54 | 0.431 | 11.3 | 0.499 | 1.52 | -- | -- | -- | 0.117 | 1.52 | -- | -- | -- | -- |
| 152.51 | 0.575 | 11.4 | 0.128 | -- | 1.45 | -- | -- | -0.358 | -- | 25.6 | 1010 | -- | -- |
| 62.79 | 0.369 | 11.4 | -- | 1.37 | 0.961 | -- | -- | -0.169 | 2.5 | 26.25 | 840 | -- | -- |
| 226.14 | 0.703 | 11.3 | 0.56 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 91.1 | 0.446 | 11.3 | -- | 1.53 | -- | -- | -- | 0.0619 | 1.53 | -- | -- | -- | -- |
| 152.9 | 0.576 | 11.4 | -- | -- | 1.49 | -- | -- | -0.383 | -- | 25.52 | 1020 | -- | -- |
| 234.41 | 0.715 | 11.3 | -- | -- | -- | -- | -- | 0.0883 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 5 | 58.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 15 | 59.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 16 | 59.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 25 | 59.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 26 | 59.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 57 | 60.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 22 |
| 59 | 60.18 | humidity | 50 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 65 | 60.27 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 72 | 60.37 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 76 | 60.41 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 19 |
| 78 | 60.45 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 14 |
| 79 | 60.46 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 17 |
| 96 | 60.61 | temperature | 25 | 720 | > th | dose independent | rect. | 9 | 17 |
| 105 | 60.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 111 | 60.70 | temperature | 15 | 720 | > th | dose dependent | sin | 18 | NA |
| 140 | 60.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 184 | 61.13 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 187 | 61.15 | temperature | 25 | 720 | > th | dose independent | sin | 18 | NA |
| 249 | 61.49 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 250 | 61.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 324 | 61.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 337 | 62.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 340 | 62.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 347 | 62.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 352 | 62.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 358 | 62.09 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 15 |
| 402 | 62.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 448 | 62.47 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 3 |
| 461 | 62.53 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 5 |
| 488 | 62.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 525 | 62.73 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 22 |
| 528 | 62.74 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 540 | 62.79 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 562 | 62.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 569 | 62.85 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 593 | 62.95 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 9 |
| 621 | 63.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 623 | 63.03 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |
| 650 | 63.11 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 23 |
| 706 | 63.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 786 | 63.43 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 826 | 63.48 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 19 |
| 827 | 63.48 | temperature | 25 | 720 | > th | dose independent | rect. | 1 | 23 |
| 828 | 63.48 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 879 | 63.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 880 | 63.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 888 | 63.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 17 |
| 891 | 63.58 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 23 |
| 903 | 63.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 907 | 63.61 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 910 | 63.61 | radiation | 1 | 4320 | > th | dose independent | rect. | 9 | 22 |
| 925 | 63.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 19 |
| 994 | 63.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 6 |