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Os04g0410300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.33 (0.0265) R2 : 0.619
β1 : 1.77 (0.097) R2dD : 0.289 R2D : 0.226
β2 : 1.4 (0.0687) R2dC : 0.35 R2C : 0.317
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.402 (0.0565) R2dN8 : 0.0567 R2N8 : -0.0064
σ : 0.498
deviance : 113.02
__
_____
C
peak time of C : 17.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.65 0.485 7.33 1.74 1.37 0.464 -0.0267 0.512 0.402 17.4 40.02 14 -- --
107.14 0.482 7.33 1.75 1.37 0.48 0.00382 -- 0.401 17.5 40.01 14 -- --
106.57 0.481 7.33 1.74 1.37 0.469 -- 0.487 0.401 17.5 40.01 16 -- --
107.14 0.482 7.33 1.75 1.37 0.48 -- -- 0.4 17.5 40 14 -- --
159.31 0.588 7.31 1.63 -- 1.49 -- -1.65 0.201 -- 20.97 604 -- --
113.02 0.498 7.33 1.77 1.4 -- -0.0157 -- 0.402 17.1 -- -- -- --
113.02 0.498 7.33 1.77 1.4 -- -- -- 0.402 17.1 -- -- -- --
110.35 0.489 7.3 1.63 -- 1.57 -- -- 0.371 -- 0.009999 630 -- --
189.02 0.644 7.38 -- 1.34 0.453 -- -- 0.212 17.5 40 14 -- --
216.5 0.688 7.32 1.72 -- -- -- -- 0.367 -- -- -- -- --
195.54 0.654 7.38 -- 1.37 -- -- -- 0.205 17.1 -- -- -- --
178.89 0.623 7.31 -- -- 1.65 -- -- 0.196 -- 0.05 645 -- --
294.45 0.801 7.36 -- -- -- -- -- 0.176 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.31 wind 9.0 90 < th dose dependent rect. 8 19
2 92.94 wind 5.0 90 < th dose independent rect. 8 19
5 93.49 wind 9.0 270 < th dose dependent rect. 6 20
9 93.77 temperature 30.0 270 < th dose dependent rect. 3 2
17 94.15 wind 9.0 270 < th dose independent rect. 5 23
19 94.23 temperature 10.0 10 > th dose dependent rect. 9 19
22 94.48 wind 5.0 270 < th dose independent rect. 6 20
23 94.48 wind 9.0 270 < th dose dependent rect. 6 8
24 94.50 temperature 10.0 10 > th dose dependent rect. 9 5
41 94.89 temperature 30.0 30 < th dose dependent rect. 4 5
56 95.17 precipitation 0.1 90 < th dose independent rect. 3 5
57 95.17 precipitation 0.1 90 < th dose dependent rect. 3 5
59 95.19 radiation 1.0 270 < th dose dependent rect. 4 1
68 95.40 wind 9.0 90 < th dose dependent rect. 8 7
69 95.41 wind 7.0 90 < th dose independent rect. 3 5
72 95.44 wind 7.0 270 < th dose independent rect. 4 1
75 95.46 temperature 10.0 90 > th dose independent rect. 3 5
77 95.46 temperature 30.0 90 < th dose independent rect. 3 5
78 95.46 humidity 50.0 90 > th dose independent rect. 3 5
80 95.46 atmosphere 995.0 90 > th dose independent rect. 3 5
81 95.46 atmosphere 1015.0 90 < th dose independent rect. 3 5
82 95.46 temperature 10.0 90 > th dose independent rect. 8 19
86 95.48 precipitation 0.1 270 < th dose independent rect. 4 1
97 95.48 precipitation 0.1 270 < th dose dependent rect. 4 1
102 95.55 temperature 10.0 270 > th dose independent rect. 4 1
104 95.55 temperature 30.0 270 < th dose independent rect. 4 1
105 95.55 humidity 50.0 270 > th dose independent rect. 4 1
108 95.55 atmosphere 995.0 270 > th dose independent rect. 4 1
109 95.55 atmosphere 1010.0 270 < th dose independent rect. 4 1
111 95.55 radiation 20.0 270 < th dose independent rect. 4 1
114 95.55 temperature 10.0 270 > th dose independent rect. 5 23
117 95.56 precipitation 0.1 90 < th dose independent rect. 8 19
118 95.56 precipitation 0.1 90 < th dose dependent rect. 8 19
121 95.61 radiation 40.0 270 < th dose dependent rect. 4 1
124 95.64 atmosphere 995.0 30 > th dose independent rect. 9 19
128 95.71 radiation 40.0 90 < th dose independent rect. 3 5
139 95.88 radiation 1.0 270 < th dose independent rect. 4 1
142 95.89 atmosphere 1000.0 270 > th dose dependent rect. 4 1
145 95.93 radiation 1.0 270 < th dose dependent rect. 3 15
148 95.94 temperature 10.0 1440 > th dose independent rect. 5 5
151 95.94 atmosphere 995.0 1440 > th dose independent rect. 5 5
152 95.94 atmosphere 1015.0 1440 < th dose independent rect. 5 5
153 95.94 temperature 10.0 1440 > th dose independent rect. 10 19
170 96.02 wind 9.0 270 < th dose dependent rect. 4 1
177 96.06 radiation 1.0 270 < th dose dependent rect. 3 11
207 96.19 atmosphere 1000.0 90 > th dose dependent rect. 3 5
235 96.38 temperature 15.0 90 > th dose independent rect. 8 7
238 96.41 wind 9.0 270 < th dose dependent rect. 9 1
254 96.51 temperature 15.0 270 > th dose independent rect. 6 8
257 96.52 temperature 10.0 270 > th dose dependent rect. 9 1
264 96.57 humidity 90.0 10 < th dose independent rect. 9 5
273 96.65 humidity 50.0 270 > th dose dependent rect. 4 1
277 96.66 wind 9.0 90 < th dose dependent rect. 3 5
279 96.67 temperature 10.0 270 > th dose dependent rect. 6 7
313 96.79 radiation 1.0 10 > th dose independent rect. 9 5
347 96.96 radiation 1.0 90 > th dose independent rect. 8 7
354 96.99 wind 7.0 270 < th dose independent rect. 6 8
375 97.14 precipitation 0.1 90 < th dose independent rect. 8 7
378 97.14 precipitation 0.1 90 < th dose dependent rect. 8 7
385 97.19 precipitation 0.1 270 < th dose independent rect. 5 22
386 97.19 precipitation 0.1 270 < th dose dependent rect. 5 22
387 97.20 wind 9.0 10 < th dose independent rect. 9 5
389 97.21 wind 9.0 90 < th dose independent rect. 8 7
398 97.25 radiation 1.0 10 > th dose independent rect. 9 7
412 97.32 humidity 90.0 10 < th dose independent rect. 9 7
413 97.33 wind 1.0 270 > th dose independent rect. 3 2
414 97.33 temperature 10.0 10 > th dose independent rect. 9 5
416 97.33 atmosphere 995.0 10 > th dose independent rect. 9 5
417 97.33 atmosphere 1015.0 10 < th dose independent rect. 9 5
418 97.33 precipitation 0.1 10 < th dose independent rect. 9 5
426 97.33 temperature 10.0 10 > th dose independent rect. 14 19
427 97.33 precipitation 0.1 10 < th dose dependent rect. 9 5
430 97.35 atmosphere 1015.0 90 < th dose independent rect. 8 7
431 97.35 temperature 10.0 90 > th dose independent rect. 15 17
447 97.38 precipitation 0.1 270 < th dose independent rect. 6 8
449 97.38 precipitation 0.1 270 < th dose dependent rect. 6 8
451 97.39 wind 9.0 10 < th dose independent rect. 9 7
452 97.39 atmosphere 995.0 90 > th dose independent rect. 8 7
453 97.39 radiation 1.0 270 < th dose independent rect. 2 16
456 97.40 precipitation 0.1 270 < th dose independent rect. 14 16
457 97.40 precipitation 0.1 270 < th dose dependent rect. 14 16
458 97.42 temperature 10.0 1440 > th dose independent rect. 10 5
461 97.42 temperature 10.0 1440 > th dose independent rect. 15 19
468 97.44 precipitation 0.1 10 < th dose independent rect. 14 19
470 97.44 precipitation 0.1 10 < th dose dependent rect. 14 19
474 97.46 wind 7.0 270 < th dose independent rect. 17 9
475 97.46 radiation 1.0 270 < th dose independent rect. 3 14
502 97.53 radiation 1.0 270 < th dose dependent sin 3 NA
506 97.55 atmosphere 995.0 270 > th dose independent rect. 6 8
507 97.55 atmosphere 1015.0 270 < th dose independent rect. 6 8
531 97.60 radiation 1.0 270 > th dose independent rect. 6 8
533 97.60 radiation 40.0 90 < th dose independent rect. 15 17
535 97.60 atmosphere 1015.0 30 < th dose independent rect. 9 19
539 97.61 atmosphere 995.0 270 > th dose independent rect. 5 22
562 97.64 temperature 30.0 30 < th dose dependent rect. 4 14
566 97.66 temperature 30.0 30 < th dose dependent rect. 4 16
585 97.68 radiation 1.0 270 < th dose independent rect. 3 11
587 97.68 temperature 10.0 270 > th dose independent rect. 6 20
592 97.70 temperature 15.0 270 > th dose independent rect. 9 1
598 97.71 radiation 1.0 270 > th dose independent rect. 9 1
609 97.73 atmosphere 995.0 10 > th dose independent rect. 9 7
632 97.80 humidity 50.0 30 > th dose independent rect. 14 19
641 97.83 radiation 40.0 30 < th dose independent rect. 4 16
645 97.84 temperature 10.0 10 > th dose independent rect. 9 7
647 97.84 atmosphere 1015.0 10 < th dose independent rect. 9 7
648 97.84 precipitation 0.1 10 < th dose independent rect. 9 7
649 97.84 temperature 10.0 10 > th dose independent rect. 16 17
651 97.84 precipitation 0.1 10 < th dose dependent rect. 9 7
656 97.85 radiation 40.0 270 < th dose dependent rect. 2 4
661 97.86 atmosphere 995.0 270 > th dose independent rect. 6 20
667 97.88 wind 9.0 30 < th dose independent rect. 14 19
680 97.92 wind 9.0 1440 < th dose independent rect. 5 5
701 97.95 atmosphere 1005.0 270 > th dose independent rect. 4 1
702 97.95 wind 1.0 270 > th dose independent rect. 1 5
718 97.96 humidity 50.0 1440 > th dose independent rect. 5 4
735 97.98 precipitation 0.1 10 < th dose independent rect. 16 17
736 97.98 precipitation 0.1 10 < th dose dependent rect. 16 17
741 98.01 wind 1.0 30 > th dose independent rect. 4 5
742 98.01 wind 9.0 90 < th dose independent rect. 15 17
763 98.06 precipitation 0.1 270 < th dose independent rect. 6 20
769 98.06 precipitation 0.1 270 < th dose dependent rect. 6 20
779 98.09 radiation 40.0 1440 < th dose dependent rect. 21 8
812 98.18 humidity 50.0 90 > th dose independent rect. 15 17
818 98.21 atmosphere 1005.0 30 > th dose independent rect. 4 5
843 98.28 atmosphere 1015.0 10 < th dose dependent rect. 9 5
855 98.31 radiation 1.0 270 < th dose independent sin 3 NA
860 98.31 humidity 50.0 10 > th dose independent rect. 16 17
862 98.32 radiation 1.0 270 > th dose independent sin 3 NA
867 98.33 wind 9.0 10 < th dose independent rect. 16 17
876 98.35 wind 5.0 30 < th dose independent rect. 20 8
885 98.37 radiation 1.0 270 > th dose independent rect. 17 21
902 98.41 atmosphere 995.0 270 > th dose independent rect. 17 9
903 98.41 radiation 10.0 270 < th dose independent rect. 17 9
938 98.44 temperature 10.0 30 > th dose dependent rect. 20 18
948 98.46 humidity 50.0 30 > th dose dependent rect. 4 5
960 98.48 atmosphere 1015.0 30 < th dose independent rect. 14 19
965 98.49 wind 7.0 270 < th dose independent rect. 9 1
987 98.54 atmosphere 995.0 10 > th dose independent rect. 14 19
988 98.54 radiation 10.0 270 < th dose dependent rect. 18 8
989 98.54 radiation 30.0 270 < th dose dependent rect. 17 9
998 98.55 wind 1.0 270 > th dose dependent rect. 11 8