Os04g0410200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0410200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.36 | 0.541 | 7.49 | 0.215 | 0.725 | 0.387 | 0.323 | -2.97 | -0.0449 | 22.7 | 21.64 | 846 | -- | -- |
| 147.96 | 0.567 | 7.45 | 0.311 | 0.728 | 0.355 | -0.139 | -- | 0.0693 | 22.4 | 35.09 | 939 | -- | -- |
| 132.69 | 0.536 | 7.49 | 0.211 | 0.732 | 0.386 | -- | -2.93 | -0.0423 | 22.7 | 21.67 | 818 | -- | -- |
| 143.15 | 0.557 | 7.49 | 0.491 | 0.919 | 1.15 | -- | -- | 0.128 | 22.4 | 57.05 | 237 | -- | -- |
| 153.91 | 0.578 | 7.45 | 0.169 | -- | 0.907 | -- | -2.45 | -0.0518 | -- | 4.631e-05 | 939 | -- | -- |
| 151.22 | 0.576 | 7.46 | 0.382 | 0.86 | -- | -0.353 | -- | 0.071 | 21.9 | -- | -- | -- | -- |
| 151.67 | 0.577 | 7.46 | 0.394 | 0.86 | -- | -- | -- | 0.0712 | 22 | -- | -- | -- | -- |
| 165.93 | 0.6 | 7.46 | 0.321 | -- | 0.923 | -- | -- | -0.0394 | -- | -3.555 | 961 | -- | -- |
| 148.9 | 0.568 | 7.46 | -- | 0.95 | 1.12 | -- | -- | 0.0608 | 22.4 | 57.12 | 233 | -- | -- |
| 196.29 | 0.655 | 7.44 | 0.405 | -- | -- | -- | -- | 0.072 | -- | -- | -- | -- | -- |
| 155.77 | 0.584 | 7.47 | -- | 0.862 | -- | -- | -- | 0.0272 | 22.1 | -- | -- | -- | -- |
| 168.34 | 0.604 | 7.48 | -- | -- | 0.967 | -- | -- | -0.0991 | -- | -1.178 | 1007 | -- | -- |
| 200.62 | 0.661 | 7.45 | -- | -- | -- | -- | -- | 0.027 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.69 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 2 | 132.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 3 | 132.58 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 4 | 132.58 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 7 | 133.00 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 8 | 133.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 10 | 133.35 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 12 | 133.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 13 | 133.39 | radiation | 10.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 14 | 133.48 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 20 |
| 32 | 133.59 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 33 | 133.60 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 36 | 133.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 38 | 133.87 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 41 | 133.90 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 42 | 134.02 | radiation | 20.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 45 | 134.12 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 52 | 134.21 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 54 | 134.23 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 72 | 134.24 | radiation | 40.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 75 | 134.27 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 78 | 134.31 | radiation | 20.0 | 720 | > th | dose independent | sin | 13 | NA |
| 80 | 134.35 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 14 |
| 81 | 134.37 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 84 | 134.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 91 | 134.42 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 96 | 134.44 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 7 | 5 |
| 100 | 134.53 | radiation | 30.0 | 720 | > th | dose independent | rect. | 14 | 19 |
| 101 | 134.53 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 104 | 134.58 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 116 | 134.61 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 137 | 134.75 | radiation | 30.0 | 720 | > th | dose independent | rect. | 15 | 17 |
| 149 | 134.87 | radiation | 20.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 155 | 134.92 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 23 |
| 156 | 134.95 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 162 | 134.95 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 174 | 134.96 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 175 | 134.97 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 176 | 134.99 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 183 | 135.04 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 23 |
| 184 | 135.06 | humidity | 60.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 189 | 135.12 | humidity | 70.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 197 | 135.17 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 200 | 135.18 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 204 | 135.21 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 205 | 135.21 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 211 | 135.23 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 3 |
| 224 | 135.24 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 250 | 135.31 | humidity | 70.0 | 720 | > th | dose independent | rect. | 11 | 23 |
| 253 | 135.32 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 254 | 135.32 | radiation | 20.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 283 | 135.43 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 22 |
| 285 | 135.44 | humidity | 70.0 | 720 | > th | dose independent | sin | 18 | NA |
| 294 | 135.47 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 308 | 135.48 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 310 | 135.49 | radiation | 10.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 311 | 135.50 | radiation | 40.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 313 | 135.51 | humidity | 70.0 | 30 | > th | dose independent | rect. | 1 | 13 |
| 315 | 135.52 | humidity | 70.0 | 720 | < th | dose independent | no | NA | NA |
| 316 | 135.52 | humidity | 70.0 | 720 | < th | dose independent | rect. | 9 | 11 |
| 319 | 135.52 | humidity | 70.0 | 720 | < th | dose independent | rect. | 6 | 14 |
| 387 | 135.54 | radiation | 20.0 | 720 | > th | dose independent | rect. | 11 | 21 |
| 394 | 135.57 | humidity | 70.0 | 720 | < th | dose independent | sin | 20 | NA |
| 396 | 135.57 | radiation | 30.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 426 | 135.60 | humidity | 70.0 | 720 | > th | dose independent | rect. | 11 | 13 |
| 432 | 135.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 436 | 135.63 | humidity | 70.0 | 720 | > th | dose independent | rect. | 6 | 22 |
| 505 | 135.76 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 23 |
| 510 | 135.78 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 537 | 135.83 | radiation | 20.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 541 | 135.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 545 | 135.86 | wind | 7.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 555 | 135.89 | radiation | 40.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 560 | 135.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 562 | 135.91 | radiation | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 563 | 135.91 | radiation | 20.0 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 654 | 135.92 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 689 | 135.96 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 14 |
| 690 | 135.96 | humidity | 70.0 | 720 | > th | dose independent | rect. | 11 | 17 |
| 703 | 135.96 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 727 | 136.00 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 730 | 136.01 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 731 | 136.01 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 732 | 136.02 | radiation | 20.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 749 | 136.02 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 759 | 136.04 | humidity | 70.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 764 | 136.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 10 |
| 768 | 136.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 770 | 136.06 | humidity | 70.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 779 | 136.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 782 | 136.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 783 | 136.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 788 | 136.10 | radiation | 20.0 | 720 | < th | dose independent | sin | 19 | NA |
| 789 | 136.10 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 794 | 136.11 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 888 | 136.14 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 889 | 136.14 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 14 |
| 895 | 136.14 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 903 | 136.16 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 10 | 8 |
| 918 | 136.17 | radiation | 30.0 | 720 | < th | dose independent | no | NA | NA |
| 920 | 136.17 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 928 | 136.17 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 937 | 136.18 | humidity | 60.0 | 30 | > th | dose independent | rect. | 1 | 21 |
| 956 | 136.19 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 959 | 136.19 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 960 | 136.19 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 961 | 136.19 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 962 | 136.19 | radiation | 30.0 | 720 | < th | dose independent | rect. | 13 | 23 |
| 974 | 136.22 | humidity | 70.0 | 1440 | > th | dose independent | sin | 8 | NA |