Os04g0402300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0402300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.04 | 0.352 | 9.1 | -0.81 | 0.456 | 0.203 | -0.595 | 1.17 | 0.163 | 3.54 | 92 | 1775 | -- | -- |
| 59.1 | 0.358 | 9.11 | -0.666 | 0.454 | 0.268 | -0.447 | -- | 0.2 | 3.48 | 91.03 | 1838 | -- | -- |
| 56.43 | 0.35 | 9.09 | -0.767 | 0.504 | 0.168 | -- | 1.32 | 0.191 | 3.39 | 92.21 | 3922 | -- | -- |
| 59.68 | 0.36 | 9.11 | -0.562 | 0.492 | 0.243 | -- | -- | 0.205 | 3.5 | 87.82 | 16898 | -- | -- |
| 68.71 | 0.386 | 9.09 | -0.804 | -- | 0.243 | -- | 1.6 | 0.186 | -- | 92.49 | 3445 | -- | -- |
| 60.49 | 0.365 | 9.12 | -0.621 | 0.491 | -- | -0.408 | -- | 0.134 | 3.67 | -- | -- | -- | -- |
| 60.98 | 0.366 | 9.12 | -0.614 | 0.49 | -- | -- | -- | 0.136 | 3.76 | -- | -- | -- | -- |
| 63.23 | 0.372 | 9.12 | -0.609 | -- | 0.447 | -- | -- | 0.171 | -- | 63.46 | 17653 | -- | -- |
| 63.52 | 0.371 | 9.08 | -- | 0.49 | 0.454 | -- | -- | 0.292 | 3.74 | 95 | 47520 | -- | -- |
| 74.23 | 0.403 | 9.12 | -0.594 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 70.92 | 0.394 | 9.1 | -- | 0.478 | -- | -- | -- | 0.204 | 3.78 | -- | -- | -- | -- |
| 73.02 | 0.399 | 9.1 | -- | -- | 0.437 | -- | -- | 0.238 | -- | 63.46 | 17653 | -- | -- |
| 83.53 | 0.427 | 9.11 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.33 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 5 | 53.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 8 | 53.42 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 8 |
| 9 | 53.43 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 10 | 53.44 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 29 | 53.65 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 30 | 53.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 34 | 53.69 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 35 | 53.69 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 46 | 53.82 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 47 | 53.86 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 51 | 53.94 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 72 | 54.06 | humidity | 90.0 | 720 | > th | dose independent | rect. | 6 | 9 |
| 76 | 54.07 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 95 | 54.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 107 | 54.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 115 | 54.17 | humidity | 90.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 136 | 54.24 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 139 | 54.25 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 143 | 54.26 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 179 | 54.32 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 194 | 54.37 | humidity | 90.0 | 720 | < th | dose independent | rect. | 6 | 7 |
| 225 | 54.42 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 239 | 54.44 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 257 | 54.47 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 5 |
| 259 | 54.47 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 7 |
| 299 | 54.53 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 316 | 54.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 317 | 54.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 321 | 54.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 349 | 54.59 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 16 |
| 368 | 54.61 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 372 | 54.61 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 375 | 54.62 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 383 | 54.63 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 7 |
| 414 | 54.67 | wind | 7.0 | 30 | < th | dose dependent | rect. | 5 | 16 |
| 448 | 54.71 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 14 |
| 452 | 54.71 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 463 | 54.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 473 | 54.73 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 480 | 54.75 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 481 | 54.75 | humidity | 70.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 509 | 54.78 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 522 | 54.79 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 551 | 54.82 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 564 | 54.83 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 574 | 54.84 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 579 | 54.84 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 583 | 54.85 | humidity | 70.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 584 | 54.85 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 590 | 54.85 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 613 | 54.87 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 617 | 54.88 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 641 | 54.90 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 669 | 54.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 692 | 54.94 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 753 | 54.98 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 788 | 55.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 817 | 55.03 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 835 | 55.04 | wind | 5.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 838 | 55.04 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 846 | 55.05 | wind | 5.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 861 | 55.06 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 870 | 55.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 903 | 55.09 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 922 | 55.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 926 | 55.11 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 22 | 13 |
| 928 | 55.11 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 15 |
| 944 | 55.12 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 952 | 55.12 | wind | 1.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 957 | 55.13 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 958 | 55.13 | wind | 5.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 961 | 55.13 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 970 | 55.14 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 1 |
| 973 | 55.14 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 989 | 55.15 | wind | 3.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 997 | 55.15 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 16 |