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Os04g0396800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase S10, serine carboxypeptidase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.47 (0.0448) R2 : 0.367
β1 : -1.4 (0.164) R2dD : 0.105 R2D : 0.00284
β2 : 1.1 (0.176) R2dC : 0.13 R2C : -0.153
β3 : -1.44 (0.199) R2dE : 0.174 R2E : -0.0962
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.61 (0.572) R2dD*E : 0.0906 R2D*E : 0.0345
γ1 : -1.05 (0.0955) R2dN8 : 0.226 R2N8 : 0.108
σ : 0.836
deviance : 321.95
__
_____
C
peak time of C : 7.7
E
wheather : temperature
threshold : 14.59
memory length : 278
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19.2
open length of G : 19.7

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
319.76 0.84 7.47 -1.38 1.08 -1.43 1.33 3.4 -1.03 7.64 14.63 271 19.2 19.8
331.71 0.848 7.48 -1.39 1.12 -1.45 3.43 -- -1.04 7.38 14.71 269 19.1 19.9
321.95 0.836 7.47 -1.4 1.1 -1.44 -- 4.61 -1.05 7.7 14.59 278 19.2 19.7
364.81 0.89 7.46 -1.29 1.3 -1.62 -- -- -1.03 7.84 14.6 327 19 20
359.79 0.883 7.51 -1.44 -- -0.552 -- 4.78 -1.03 -- 12.26 229 19.2 20.2
370.53 0.902 7.49 -1.37 0.119 -- 3.58 -- -0.991 7.31 -- -- -- --
404.34 0.942 7.49 -1.29 0.162 -- -- -- -0.996 10.2 -- -- -- --
386.23 0.915 7.46 -1.22 -- -1.05 -- -- -1.01 -- 14.8 92 19 22.6
407.03 0.94 7.47 -- 1.22 -1.71 -- -- -0.949 7.56 14.8 318 18.9 20.1
405.94 0.941 7.49 -1.29 -- -- -- -- -0.996 -- -- -- -- --
448.14 0.99 7.46 -- 0.17 -- -- -- -0.852 10.8 -- -- -- --
396.42 0.927 7.49 -- -- -1.57 -- -- -0.757 -- 16.7 14157 18.5 20.5
449.93 0.99 7.46 -- -- -- -- -- -0.853 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 323.98 atmosphere 1015.0 270 < th dose dependent rect. 15 4
3 326.03 temperature 15.0 270 > th dose independent rect. 19 20
12 328.00 temperature 15.0 30 > th dose independent rect. 20 21
14 328.05 humidity 90.0 14400 > th dose independent rect. 13 1
16 328.83 temperature 15.0 10 > th dose independent rect. 23 17
19 329.85 humidity 50.0 270 > th dose independent rect. 19 20
20 330.12 humidity 90.0 30 < th dose independent rect. 17 3
22 330.28 humidity 90.0 14400 < th dose independent rect. 13 1
23 330.28 wind 9.0 270 < th dose dependent rect. 15 5
24 330.45 precipitation 0.1 270 < th dose independent rect. 15 4
25 330.45 precipitation 0.1 270 < th dose dependent rect. 15 4
29 330.68 atmosphere 1015.0 10 < th dose dependent rect. 16 7
33 330.91 humidity 60.0 270 > th dose independent rect. 11 15
34 330.98 temperature 10.0 270 > th dose independent rect. 15 4
36 330.98 atmosphere 1010.0 270 < th dose independent rect. 15 4
39 331.02 atmosphere 1015.0 270 < th dose independent rect. 14 7
40 331.04 precipitation 0.1 270 < th dose independent rect. 14 7
42 331.04 humidity 80.0 14400 > th dose dependent rect. 13 1
43 331.04 precipitation 0.1 270 < th dose dependent rect. 14 7
46 331.18 wind 9.0 270 < th dose independent rect. 15 4
47 331.20 atmosphere 1000.0 270 > th dose independent rect. 19 20
51 331.25 precipitation 0.1 14400 < th dose independent rect. 7 9
53 331.25 precipitation 0.1 14400 < th dose dependent rect. 7 9
56 331.39 wind 1.0 270 > th dose independent rect. 15 4
57 331.43 precipitation 0.1 14400 > th dose independent rect. 7 9
59 331.45 humidity 80.0 14400 > th dose dependent rect. 13 4
61 331.48 humidity 50.0 270 > th dose independent rect. 21 17
63 331.50 wind 9.0 270 < th dose independent rect. 19 20
67 331.56 temperature 10.0 270 > th dose dependent rect. 15 4
71 331.63 temperature 15.0 10 > th dose independent rect. 12 15
84 331.83 radiation 1.0 90 < th dose dependent rect. 17 2
87 331.89 humidity 80.0 14400 > th dose independent rect. 13 4
92 331.96 humidity 80.0 14400 > th dose dependent rect. 16 1
97 332.05 temperature 10.0 270 > th dose independent rect. 14 7
99 332.05 atmosphere 995.0 270 > th dose independent rect. 21 17
103 332.12 temperature 20.0 30 > th dose independent rect. 17 3
110 332.21 wind 9.0 270 < th dose independent rect. 21 17
127 332.56 wind 1.0 270 > th dose independent rect. 14 7
128 332.61 wind 9.0 270 < th dose independent rect. 14 7
145 332.82 radiation 1.0 90 < th dose independent rect. 17 2
148 332.86 radiation 1.0 10 < th dose dependent rect. 17 3
150 332.89 temperature 15.0 90 > th dose independent rect. 12 15
151 332.89 precipitation 0.1 270 < th dose independent rect. 19 20
152 332.89 precipitation 0.1 270 < th dose dependent rect. 19 20
167 333.10 radiation 40.0 270 < th dose independent rect. 15 4
168 333.11 humidity 50.0 30 > th dose independent rect. 20 21
177 333.24 radiation 1.0 270 > th dose independent rect. 15 17
185 333.40 humidity 80.0 14400 < th dose independent rect. 13 4
186 333.40 precipitation 0.1 270 < th dose independent rect. 21 17
187 333.40 precipitation 0.1 270 < th dose dependent rect. 21 17
204 333.59 temperature 15.0 270 > th dose independent rect. 10 16
213 333.66 atmosphere 995.0 270 > th dose independent rect. 15 4
215 333.66 precipitation 0.1 14400 > th dose dependent rect. 6 10
258 334.03 humidity 90.0 14400 > th dose independent rect. 7 1
267 334.08 precipitation 0.1 270 < th dose independent rect. 2 8
268 334.08 precipitation 0.1 270 < th dose dependent rect. 2 8
270 334.09 humidity 90.0 14400 > th dose dependent rect. 7 1
304 334.48 atmosphere 995.0 270 > th dose independent rect. 14 7
313 334.63 wind 7.0 270 < th dose independent rect. 2 8
314 334.63 wind 9.0 43200 < th dose dependent rect. 5 1
321 334.67 precipitation 0.1 14400 > th dose independent rect. 14 2
323 334.67 precipitation 0.1 14400 > th dose dependent rect. 14 2
342 334.78 atmosphere 1000.0 30 > th dose independent rect. 20 21
347 334.79 wind 3.0 14400 < th dose dependent rect. 1 2
356 334.85 wind 1.0 43200 > th dose dependent rect. 5 1
388 335.11 atmosphere 995.0 270 > th dose independent rect. 10 16
391 335.13 precipitation 0.1 14400 < th dose independent rect. 14 2
393 335.13 precipitation 0.1 14400 < th dose dependent rect. 14 2
401 335.16 radiation 1.0 270 > th dose dependent rect. 15 17
405 335.18 humidity 90.0 14400 > th dose independent rect. 12 11
410 335.20 temperature 30.0 270 < th dose independent rect. 2 8
412 335.21 wind 3.0 43200 < th dose independent rect. 5 3
427 335.30 wind 3.0 43200 > th dose independent rect. 5 3
429 335.34 humidity 90.0 14400 > th dose independent rect. 16 7
431 335.34 temperature 10.0 270 > th dose dependent rect. 20 18
441 335.37 wind 3.0 43200 > th dose independent rect. 7 1
454 335.44 radiation 20.0 30 < th dose dependent rect. 16 4
467 335.51 temperature 10.0 270 > th dose independent rect. 2 8
468 335.51 atmosphere 995.0 270 > th dose independent rect. 2 8
469 335.51 atmosphere 1015.0 270 < th dose independent rect. 2 8
473 335.52 humidity 50.0 270 > th dose independent rect. 2 8
478 335.55 temperature 20.0 14400 < th dose independent rect. 19 2
489 335.59 temperature 20.0 14400 > th dose independent rect. 18 1
495 335.61 humidity 50.0 10 > th dose independent rect. 17 3
504 335.62 temperature 30.0 14400 < th dose dependent rect. 13 1
505 335.65 atmosphere 995.0 30 > th dose independent rect. 17 3
508 335.67 radiation 40.0 30 < th dose independent rect. 20 21
518 335.69 precipitation 0.1 30 < th dose independent rect. 17 3
520 335.69 precipitation 0.1 30 < th dose dependent rect. 17 3
547 335.81 humidity 90.0 14400 > th dose independent rect. 7 16
565 335.86 wind 1.0 14400 > th dose dependent rect. 24 4
600 335.98 wind 9.0 10 < th dose independent rect. 12 15
607 336.01 wind 1.0 30 > th dose independent rect. 17 3
608 336.01 radiation 30.0 43200 < th dose independent rect. 17 4
609 336.01 wind 9.0 270 < th dose independent rect. 10 16
620 336.07 humidity 80.0 14400 > th dose independent rect. 10 1
635 336.12 temperature 10.0 30 > th dose independent rect. 17 3
637 336.12 atmosphere 1010.0 30 < th dose independent rect. 17 3
639 336.12 radiation 20.0 30 < th dose independent rect. 17 3
645 336.12 humidity 90.0 14400 > th dose independent rect. 9 14
648 336.12 wind 1.0 14400 > th dose dependent rect. 23 6
652 336.14 humidity 80.0 14400 > th dose dependent sin 22 NA
659 336.17 radiation 40.0 30 < th dose independent rect. 23 17
684 336.24 wind 5.0 43200 < th dose dependent rect. 1 7
686 336.25 wind 9.0 14400 < th dose dependent rect. 24 4
687 336.26 humidity 90.0 14400 > th dose independent sin 20 NA
700 336.31 temperature 30.0 14400 < th dose dependent rect. 13 4
706 336.32 temperature 10.0 30 > th dose dependent rect. 17 3
739 336.41 wind 9.0 30 < th dose independent rect. 17 3
759 336.46 wind 7.0 14400 < th dose dependent rect. 23 6
768 336.49 precipitation 0.1 270 < th dose independent rect. 10 16
769 336.49 precipitation 0.1 270 < th dose dependent rect. 10 16
797 336.61 temperature 30.0 14400 < th dose dependent rect. 16 1
834 336.71 wind 9.0 14400 < th dose independent rect. 6 5
851 336.74 precipitation 0.1 10 < th dose independent rect. 3 9
853 336.74 temperature 25.0 14400 < th dose dependent rect. 18 1
855 336.74 precipitation 0.1 10 < th dose dependent rect. 3 9
861 336.76 humidity 90.0 14400 < th dose independent rect. 16 4
871 336.79 wind 9.0 90 < th dose independent rect. 12 15
915 336.88 wind 3.0 43200 > th dose independent rect. 1 8
923 336.89 wind 3.0 43200 < th dose independent rect. 1 7
935 336.90 humidity 90.0 270 < th dose dependent rect. 15 3
955 336.96 humidity 90.0 14400 > th dose independent rect. 19 1
961 336.98 humidity 90.0 14400 < th dose independent rect. 7 1
989 337.01 humidity 90.0 14400 < th dose independent rect. 7 13