Os04g0395800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os04g0395800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 553.37 | 1.11 | 4.01 | 0.00329 | 0.0171 | 11.4 | 1.4 | 25.9 | 1.41 | 3.1 | 7.512 | 270 | 4.96 | -- |
| 583.08 | 1.12 | 3.9 | -0.47 | 0.183 | 8.54 | 2 | -- | 1.36 | 4.09 | 7.588 | 140 | 5.72 | -- |
| 558.1 | 1.1 | 4.05 | -0.0459 | 0.137 | 12 | -- | 28.5 | 1.34 | 8.02 | 7.586 | 271 | 5.02 | -- |
| 574.26 | 1.12 | 3.93 | -0.568 | 0.282 | 7.46 | -- | -- | 1.33 | 4.97 | 7.172 | 128 | 5.98 | -- |
| 559.49 | 1.1 | 4.01 | -0.0347 | -- | 11.1 | -- | 24.7 | 1.41 | -- | 7.664 | 276 | 4.92 | -- |
| 696.33 | 1.24 | 3.94 | -0.728 | 0.0434 | -- | 1.54 | -- | 1.26 | 4.38 | -- | -- | -- | -- |
| 702.7 | 1.24 | 3.94 | -0.742 | 0.0656 | -- | -- | -- | 1.25 | 1.68 | -- | -- | -- | -- |
| 576.14 | 1.12 | 3.9 | -0.332 | -- | 7.38 | -- | -- | 1.37 | -- | 7.062 | 126 | 5.88 | -- |
| 567.86 | 1.11 | 3.89 | -- | 0.357 | 6.82 | -- | -- | 1.41 | 5.78 | 5.779 | 94 | 6.03 | -- |
| 702.96 | 1.24 | 3.94 | -0.739 | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
| 717.2 | 1.25 | 3.92 | -- | 0.0525 | -- | -- | -- | 1.33 | 1.25 | -- | -- | -- | -- |
| 573.36 | 1.12 | 3.9 | -- | -- | 6.7 | -- | -- | 1.43 | -- | 6.066 | 102 | 5.57 | -- |
| 717.37 | 1.25 | 3.92 | -- | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 555.68 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 556.30 | wind | 9 | 270 | < th | dose independent | sin | 11 | NA |
| 3 | 556.99 | wind | 9 | 270 | > th | dose independent | sin | 11 | NA |
| 4 | 560.00 | wind | 7 | 270 | > th | dose dependent | sin | 11 | NA |
| 7 | 561.20 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 11 | 562.67 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 22 | 566.91 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 23 | 567.06 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 1 |
| 24 | 567.20 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 23 |
| 26 | 567.49 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 34 | 567.77 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 37 | 567.85 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 43 | 568.46 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 53 | 568.50 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 3 |
| 54 | 568.57 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 5 |
| 89 | 572.67 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 17 |
| 107 | 573.48 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 14 |
| 116 | 573.74 | wind | 9 | 720 | > th | dose dependent | sin | 17 | NA |
| 118 | 573.87 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 11 |
| 140 | 574.46 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 23 |
| 142 | 574.61 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 149 | 574.79 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 154 | 575.06 | wind | 9 | 720 | < th | dose independent | sin | 17 | NA |
| 163 | 575.62 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 9 |
| 171 | 575.64 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 172 | 575.64 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 17 |
| 187 | 575.64 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 22 |
| 213 | 575.73 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 8 |
| 221 | 575.79 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 222 | 575.79 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 237 | 575.79 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 261 | 576.10 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 14 |
| 286 | 576.11 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 313 | 576.17 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 329 | 576.46 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 355 | 576.99 | wind | 9 | 720 | > th | dose independent | sin | 20 | NA |
| 408 | 578.79 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 427 | 579.44 | wind | 9 | 720 | < th | dose independent | rect. | 13 | 16 |
| 433 | 579.64 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 6 |
| 497 | 580.75 | wind | 9 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 614 | 582.89 | wind | 7 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 632 | 584.14 | wind | 9 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 646 | 584.79 | wind | 9 | 720 | > th | dose dependent | sin | 8 | NA |
| 889 | 589.32 | wind | 9 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 897 | 589.56 | wind | 9 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 921 | 589.71 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 974 | 590.66 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 977 | 590.74 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 982 | 590.82 | wind | 9 | 1440 | < th | dose independent | rect. | 6 | 11 |