Os04g0390100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0390100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 291.14 | 0.802 | 6.49 | 0.0724 | 1.78 | 4.1 | 0.987 | 1.34 | -0.884 | 5.7 | 8.642 | 259 | 10.1 | 23 |
| 291.61 | 0.795 | 6.52 | -0.0625 | 1.76 | 4.1 | 0.668 | -- | -0.937 | 5.84 | 7.581 | 267 | 10.1 | 22.9 |
| 291.96 | 0.796 | 6.49 | 0.0431 | 1.7 | 4.01 | -- | 0.37 | -0.891 | 5.98 | 3.81 | 269 | 10.1 | 23 |
| 291.34 | 0.795 | 6.52 | -0.122 | 1.78 | 4.22 | -- | -- | -0.938 | 6.04 | 1.389 | 267 | 10 | 23.1 |
| 297.02 | 0.803 | 6.52 | 0.0368 | -- | 3.68 | -- | 1.57 | -0.79 | -- | -9.032 | 1105 | 10.9 | 22 |
| 475.89 | 1.02 | 6.41 | 0.675 | 0.8 | -- | -0.08 | -- | -0.322 | 3.92 | -- | -- | -- | -- |
| 475.91 | 1.02 | 6.41 | 0.677 | 0.799 | -- | -- | -- | -0.321 | 3.91 | -- | -- | -- | -- |
| 298.58 | 0.805 | 6.53 | -0.0616 | -- | 3.59 | -- | -- | -0.86 | -- | -8.741 | 1096 | 10.9 | 22.1 |
| 291.42 | 0.795 | 6.52 | -- | 1.73 | 4.17 | -- | -- | -0.948 | 6.02 | 1.064 | 265 | 10.1 | 23.1 |
| 510.92 | 1.06 | 6.41 | 0.709 | -- | -- | -- | -- | -0.3 | -- | -- | -- | -- | -- |
| 487.98 | 1.03 | 6.42 | -- | 0.812 | -- | -- | -- | -0.396 | 3.9 | -- | -- | -- | -- |
| 298.6 | 0.805 | 6.54 | -- | -- | 3.48 | -- | -- | -0.838 | -- | -9.276 | 1103 | 10.8 | 22 |
| 524.19 | 1.07 | 6.43 | -- | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.30 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 2 | 293.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 13 | 301.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 17 | 302.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 26 | 303.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 122 | 310.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 135 | 311.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 18 |
| 193 | 312.04 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 361 | 313.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 506 | 314.35 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 510 | 314.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 875 | 316.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 922 | 317.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 929 | 317.12 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |