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Os04g0389600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.8 (0.0238) R2 : 0.439
β1 : -1.3 (0.0873) R2dD : 0.284 R2D : 0.318
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.434 (0.0509) R2dN8 : 0.12 R2N8 : 0.155
σ : 0.447
deviance : 91.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.44 0.362 8.87 -1.79 0.477 -0.64 0.811 1.68 0.224 1.32 23.71 1040 -- --
61.03 0.367 8.84 -1.5 0.681 -1.02 0.409 -- 0.312 1.03 22.31 2236 -- --
60.88 0.363 8.86 -1.69 0.589 -0.674 -- 1.53 0.257 1.23 23.22 336 -- --
61.7 0.368 8.84 -1.51 0.684 -1.01 -- -- 0.305 0.939 22.54 1485 -- --
74.61 0.402 8.88 -1.8 -- -0.847 -- 1.36 0.178 -- 26.7 925 -- --
72.42 0.399 8.81 -1.31 0.545 -- 0.456 -- 0.426 1.09 -- -- -- --
73.27 0.401 8.81 -1.32 0.543 -- -- -- 0.424 0.948 -- -- -- --
76.27 0.407 8.84 -1.61 -- -1.1 -- -- 0.253 -- 23.04 1007 -- --
117.36 0.507 8.79 -- 0.575 -0.398 -- -- 0.534 0.84 22.4 20 -- --
91.65 0.447 8.8 -1.3 -- -- -- -- 0.434 -- -- -- -- --
119.27 0.511 8.78 -- 0.522 -- -- -- 0.571 0.84 -- -- -- --
134.68 0.541 8.78 -- -- -0.299 -- -- 0.525 -- 25.2 872 -- --
136.3 0.545 8.77 -- -- -- -- -- 0.579 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.30 wind 9.0 43200 > th dose dependent rect. 18 1
2 56.43 wind 9.0 43200 > th dose independent rect. 18 1
3 56.72 wind 9.0 43200 < th dose independent rect. 18 1
4 57.38 humidity 90.0 14400 > th dose dependent rect. 18 11
6 57.43 humidity 90.0 14400 > th dose dependent rect. 2 8
12 57.52 temperature 20.0 14400 < th dose independent rect. 20 1
13 57.55 humidity 90.0 14400 > th dose dependent rect. 5 1
30 57.83 humidity 90.0 14400 > th dose dependent sin 10 NA
34 57.87 precipitation 0.1 14400 < th dose independent rect. 9 1
36 57.87 precipitation 0.1 14400 < th dose dependent rect. 9 1
39 57.89 humidity 90.0 14400 > th dose dependent rect. 20 14
48 57.95 precipitation 0.1 14400 > th dose independent rect. 9 1
49 57.95 precipitation 0.1 14400 > th dose dependent rect. 9 1
75 58.08 radiation 1.0 4320 < th dose dependent rect. 7 2
88 58.12 humidity 80.0 43200 < th dose independent rect. 6 1
101 58.20 radiation 10.0 43200 < th dose dependent rect. 13 1
104 58.22 radiation 1.0 14400 < th dose independent rect. 7 1
121 58.31 radiation 1.0 14400 > th dose independent rect. 7 1
125 58.34 precipitation 0.1 14400 > th dose independent rect. 6 2
126 58.34 precipitation 0.1 14400 > th dose dependent rect. 6 2
155 58.46 wind 1.0 43200 > th dose independent rect. 2 1
162 58.48 wind 7.0 43200 > th dose dependent rect. 10 3
164 58.52 humidity 80.0 43200 > th dose independent rect. 6 1
167 58.53 humidity 80.0 43200 > th dose dependent rect. 12 1
195 58.64 temperature 20.0 14400 > th dose independent rect. 20 2
202 58.68 humidity 90.0 14400 > th dose independent rect. 12 2
208 58.69 precipitation 0.1 14400 < th dose independent rect. 7 3
209 58.69 precipitation 0.1 14400 > th dose independent rect. 5 5
210 58.69 precipitation 0.1 14400 < th dose dependent rect. 7 3
212 58.70 radiation 10.0 43200 < th dose independent rect. 17 13
214 58.71 temperature 20.0 14400 > th dose independent rect. 7 1
215 58.71 temperature 20.0 14400 < th dose independent rect. 7 1
216 58.71 precipitation 0.1 14400 < th dose independent rect. 7 1
217 58.71 wind 7.0 43200 > th dose independent rect. 10 2
218 58.71 radiation 30.0 43200 < th dose independent rect. 24 7
219 58.71 precipitation 0.1 14400 < th dose dependent rect. 7 1
227 58.73 radiation 30.0 43200 < th dose independent rect. 17 14
236 58.78 temperature 20.0 14400 > th dose independent rect. 20 5
246 58.81 radiation 30.0 43200 < th dose independent rect. 19 12
250 58.83 wind 9.0 43200 < th dose independent rect. 10 2
271 58.89 precipitation 0.1 14400 > th dose independent rect. 5 8
272 58.89 radiation 10.0 43200 < th dose independent rect. 17 9
277 58.90 radiation 10.0 43200 < th dose independent rect. 17 2
286 58.90 wind 1.0 43200 > th dose dependent rect. 5 1
288 58.90 precipitation 0.1 14400 > th dose dependent rect. 5 5
293 58.91 precipitation 0.1 43200 > th dose dependent rect. 16 1
299 58.93 wind 7.0 43200 > th dose independent rect. 24 1
310 58.96 wind 9.0 43200 > th dose dependent rect. 22 1
311 58.97 radiation 30.0 43200 < th dose independent rect. 6 1
312 58.97 precipitation 0.1 14400 < th dose independent rect. 5 5
314 58.97 precipitation 0.1 14400 < th dose dependent rect. 5 5
317 58.98 wind 7.0 43200 < th dose independent rect. 24 1
318 58.98 humidity 70.0 43200 > th dose independent rect. 10 1
321 58.98 precipitation 0.1 14400 > th dose dependent rect. 5 8
329 59.01 radiation 20.0 43200 > th dose independent rect. 9 2
331 59.01 radiation 30.0 43200 < th dose independent rect. 3 4
348 59.06 precipitation 0.1 14400 < th dose independent rect. 5 8
349 59.06 precipitation 0.1 14400 < th dose dependent rect. 5 8
356 59.07 humidity 90.0 14400 > th dose dependent rect. 24 22
361 59.08 wind 9.0 14400 > th dose dependent rect. 5 7
367 59.10 precipitation 0.1 43200 > th dose independent rect. 16 1
379 59.13 wind 9.0 43200 < th dose dependent rect. 5 1
387 59.14 wind 7.0 43200 > th dose dependent rect. 24 1
389 59.15 precipitation 0.1 43200 < th dose independent rect. 16 1
393 59.15 precipitation 0.1 43200 < th dose dependent rect. 16 1
399 59.16 radiation 40.0 43200 < th dose dependent rect. 24 5
434 59.24 wind 9.0 43200 > th dose dependent rect. 18 5
447 59.26 radiation 20.0 14400 > th dose independent rect. 6 1
455 59.26 wind 7.0 43200 > th dose independent rect. 4 9
466 59.27 radiation 1.0 4320 < th dose independent rect. 7 5
476 59.28 precipitation 0.1 43200 > th dose dependent rect. 13 4
478 59.29 precipitation 0.1 43200 > th dose independent rect. 13 5
480 59.30 humidity 70.0 43200 < th dose independent rect. 10 2
481 59.30 radiation 1.0 4320 > th dose independent rect. 7 5
482 59.30 precipitation 0.1 43200 > th dose independent rect. 13 7
486 59.30 wind 9.0 43200 > th dose dependent rect. 18 7
492 59.31 humidity 90.0 14400 > th dose dependent no NA NA
496 59.32 wind 7.0 43200 < th dose independent rect. 7 6
510 59.35 wind 7.0 43200 > th dose independent rect. 21 16
525 59.38 wind 9.0 43200 < th dose dependent rect. 1 1
526 59.38 humidity 80.0 43200 < th dose dependent rect. 6 1
531 59.39 wind 7.0 43200 < th dose independent rect. 5 8
533 59.39 radiation 30.0 4320 < th dose independent rect. 16 16
534 59.39 temperature 25.0 14400 < th dose dependent rect. 8 1
535 59.39 precipitation 0.1 43200 > th dose dependent rect. 21 2
536 59.39 radiation 1.0 43200 > th dose dependent rect. 18 11
538 59.40 radiation 10.0 14400 < th dose independent rect. 12 2
539 59.40 precipitation 0.1 43200 < th dose independent rect. 13 7
544 59.40 wind 1.0 43200 > th dose dependent rect. 1 1
546 59.40 precipitation 0.1 43200 < th dose dependent rect. 13 7
547 59.41 humidity 60.0 43200 > th dose independent rect. 18 1
549 59.41 precipitation 0.1 43200 < th dose independent rect. 13 5
554 59.41 precipitation 0.1 43200 < th dose dependent rect. 13 5
564 59.43 precipitation 0.1 43200 > th dose independent rect. 21 2
569 59.43 temperature 25.0 720 < th dose dependent rect. 4 22
585 59.45 wind 7.0 43200 < th dose independent rect. 21 16
586 59.45 wind 9.0 43200 < th dose independent rect. 21 18
590 59.46 radiation 20.0 43200 < th dose independent rect. 10 1
591 59.46 precipitation 0.1 43200 < th dose independent rect. 21 2
593 59.46 radiation 10.0 43200 < th dose independent rect. 24 6
600 59.46 precipitation 0.1 43200 < th dose dependent rect. 21 2
601 59.47 wind 1.0 43200 > th dose independent rect. 11 1
603 59.47 radiation 10.0 43200 < th dose independent rect. 3 3
611 59.47 humidity 70.0 43200 > th dose independent rect. 4 8
617 59.47 radiation 30.0 43200 < th dose dependent rect. 19 10
653 59.50 wind 9.0 43200 < th dose independent rect. 24 15
681 59.53 wind 9.0 43200 < th dose independent rect. 19 21
686 59.54 wind 9.0 43200 > th dose independent rect. 22 1
694 59.54 humidity 70.0 43200 > th dose independent rect. 3 12
703 59.55 wind 1.0 43200 < th dose independent rect. 2 1
711 59.55 radiation 20.0 14400 > th dose dependent rect. 6 2
727 59.56 radiation 40.0 43200 > th dose independent rect. 11 1
731 59.56 humidity 60.0 43200 < th dose dependent rect. 8 1
732 59.56 radiation 40.0 43200 < th dose dependent rect. 10 1
744 59.57 humidity 50.0 43200 < th dose dependent rect. 12 1
755 59.58 wind 7.0 43200 > th dose independent rect. 19 18
776 59.60 wind 9.0 43200 > th dose independent rect. 19 21
787 59.61 wind 9.0 43200 < th dose dependent rect. 22 8
789 59.62 radiation 1.0 43200 > th dose independent rect. 10 4
790 59.62 radiation 1.0 43200 < th dose independent rect. 10 4
801 59.62 radiation 1.0 43200 < th dose dependent rect. 10 4
802 59.62 precipitation 0.1 43200 > th dose dependent rect. 13 6
812 59.63 radiation 1.0 43200 < th dose dependent rect. 7 8
815 59.64 humidity 60.0 43200 < th dose independent rect. 18 1
829 59.64 wind 1.0 43200 < th dose dependent rect. 11 1
841 59.65 humidity 90.0 43200 < th dose dependent rect. 11 1
847 59.65 temperature 25.0 720 < th dose dependent rect. 23 23
861 59.66 wind 7.0 43200 < th dose independent rect. 19 18
896 59.68 precipitation 0.1 43200 > th dose dependent rect. 13 9
898 59.69 wind 9.0 43200 < th dose independent sin 2 NA
907 59.69 radiation 1.0 43200 > th dose dependent rect. 18 1
928 59.70 wind 9.0 43200 < th dose independent rect. 22 1
974 59.73 temperature 25.0 720 < th dose dependent no NA NA
987 59.74 wind 9.0 43200 > th dose independent rect. 18 7
992 59.74 humidity 70.0 43200 < th dose independent rect. 3 10