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Os04g0387600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0204) R2 : 0.595
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.77 (0.053) R2dC : 0.195 R2C : 0.277
β3 : -1.56 (0.0868) R2dE : 0.335 R2E : 0.393
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0725 (0.0453) R2dN8 : 0.0034 R2N8 : -0.0186
σ : 0.378
deviance : 65.86
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C
peak time of C : 19.3
E
wheather : temperature
threshold : 27.35
memory length : 140
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.92 0.358 11.6 0.242 0.866 -1.29 -0.367 1.45 -0.026 19.3 28.6 40 -- --
60.38 0.362 11.6 0.494 0.846 -1.32 -0.466 -- 0.0344 19 27.39 92 -- --
58.26 0.356 11.6 0.245 0.86 -1.31 -- 1.46 -0.0296 19.4 28.6 46 -- --
60.62 0.363 11.6 0.487 0.809 -1.34 -- -- 0.0198 19 27.23 139 -- --
79.27 0.415 11.6 0.0257 -- -2.07 -- 2.17 -0.0805 -- 41.12 341 -- --
84.73 0.432 11.5 0.813 1.05 -- -0.814 -- 0.317 17.8 -- -- -- --
86.27 0.435 11.5 0.817 1.05 -- -- -- 0.313 17.9 -- -- -- --
82.52 0.423 11.5 0.368 -- -2.01 -- -- 0.0125 -- 49.26 356 -- --
65.86 0.378 11.6 -- 0.77 -1.56 -- -- -0.0725 19.3 27.35 140 -- --
142.88 0.559 11.5 0.785 -- -- -- -- 0.289 -- -- -- -- --
103.85 0.477 11.5 -- 1.03 -- -- -- 0.223 18 -- -- -- --
84.53 0.428 11.6 -- -- -2.01 -- -- -0.114 -- 30.5 355 -- --
159.15 0.589 11.5 -- -- -- -- -- 0.202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.71 temperature 30 10 < th dose dependent rect. 1 23
2 57.84 temperature 30 30 < th dose dependent rect. 3 23
3 57.92 temperature 30 90 < th dose dependent rect. 11 22
4 57.99 temperature 30 10 < th dose dependent rect. 13 23
6 58.09 temperature 25 1440 > th dose independent rect. 10 15
9 58.21 temperature 25 1440 < th dose independent rect. 15 10
10 58.23 temperature 30 90 < th dose dependent rect. 9 23
11 58.23 temperature 30 30 < th dose dependent rect. 19 23
12 58.24 temperature 25 1440 < th dose independent rect. 10 15
14 58.26 temperature 30 10 < th dose dependent rect. 11 23
15 58.27 temperature 25 1440 > th dose independent rect. 15 10
23 58.34 temperature 30 30 < th dose dependent no NA NA
26 58.39 wind 5 43200 > th dose dependent rect. 14 7
29 58.40 temperature 30 10 < th dose dependent rect. 15 23
40 58.52 temperature 25 1440 < th dose independent sin 17 NA
53 58.61 temperature 25 1440 > th dose independent sin 17 NA
59 58.65 wind 7 43200 < th dose independent rect. 14 7
62 58.66 temperature 20 720 > th dose dependent rect. 13 20
67 58.71 temperature 10 720 > th dose dependent rect. 13 21
78 58.79 temperature 20 30 > th dose dependent no NA NA
100 58.95 wind 7 43200 > th dose independent rect. 14 7
112 59.01 temperature 20 90 > th dose dependent rect. 6 23
117 59.03 temperature 30 30 < th dose dependent rect. 5 23
118 59.04 temperature 30 30 < th dose dependent rect. 17 23
137 59.12 wind 5 43200 > th dose dependent rect. 14 2
138 59.12 temperature 20 1440 > th dose dependent rect. 13 16
151 59.17 wind 5 43200 > th dose independent rect. 13 9
154 59.17 temperature 20 90 > th dose dependent rect. 22 23
159 59.21 wind 7 43200 > th dose independent rect. 14 5
168 59.24 temperature 20 1440 > th dose dependent rect. 11 19
184 59.29 temperature 30 90 < th dose dependent rect. 23 23
198 59.35 wind 7 43200 < th dose independent rect. 14 2
261 59.53 temperature 20 1440 > th dose dependent sin 16 NA
270 59.55 temperature 10 720 > th dose dependent rect. 6 21
283 59.59 wind 5 43200 > th dose independent rect. 16 5
328 59.68 temperature 20 1440 > th dose dependent rect. 17 1
333 59.69 temperature 20 30 > th dose dependent rect. 4 23
340 59.70 temperature 10 720 > th dose dependent rect. 6 19
357 59.74 temperature 10 720 > th dose dependent rect. 4 21
359 59.74 temperature 20 30 > th dose dependent rect. 2 23
360 59.75 wind 7 43200 > th dose independent rect. 14 2
373 59.77 temperature 30 30 < th dose dependent rect. 21 23
418 59.87 wind 7 43200 < th dose independent rect. 13 17
434 59.89 temperature 10 270 > th dose dependent rect. 4 23
440 59.90 temperature 30 30 < th dose dependent rect. 7 23
494 59.99 wind 7 43200 > th dose independent rect. 13 17
529 60.06 wind 5 43200 > th dose independent rect. 17 1
536 60.07 wind 5 43200 > th dose dependent sin 18 NA
582 60.14 temperature 20 90 > th dose dependent rect. 13 23
588 60.15 temperature 30 720 < th dose dependent rect. 10 20
615 60.19 wind 7 43200 < th dose independent rect. 17 2
622 60.20 temperature 25 1440 < th dose independent rect. 16 3
629 60.21 wind 5 43200 > th dose independent sin 18 NA
663 60.24 temperature 30 270 < th dose dependent rect. 21 23
701 60.31 radiation 1 720 < th dose dependent rect. 5 23
704 60.32 temperature 30 1440 < th dose dependent rect. 17 1
727 60.35 temperature 20 1440 > th dose dependent rect. 21 21
744 60.37 temperature 25 1440 < th dose independent rect. 15 23
748 60.37 temperature 20 90 > th dose dependent rect. 15 23
752 60.38 temperature 25 1440 > th dose independent rect. 15 23
778 60.40 temperature 20 1440 > th dose dependent rect. 24 23
784 60.41 temperature 20 1440 > th dose dependent no NA NA
801 60.43 wind 5 43200 < th dose independent sin 18 NA
816 60.45 temperature 25 1440 > th dose independent no NA NA
823 60.45 temperature 20 1440 > th dose dependent rect. 2 23
828 60.46 temperature 25 1440 < th dose independent no NA NA
852 60.48 temperature 25 1440 > th dose independent rect. 16 3
888 60.52 radiation 1 720 < th dose dependent rect. 3 23
892 60.53 temperature 25 1440 > th dose independent rect. 20 23
928 60.56 temperature 20 1440 > th dose dependent rect. 15 23
964 60.60 temperature 25 1440 < th dose independent rect. 20 23
993 60.63 temperature 10 720 > th dose dependent rect. 13 16