Os04g0385600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, MYND-type domain containing protein.
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Os04g0385600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, MYND-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.56 | 0.735 | 7.06 | 2.44 | 0.492 | -2.41 | 1.93 | 3.57 | 0.227 | 20.9 | 22.19 | 502 | -- | -- |
| 249.98 | 0.736 | 7.13 | 1.79 | 0.336 | -2.16 | 2.69 | -- | 0.046 | 20.1 | 21.42 | 428 | -- | -- |
| 249.71 | 0.736 | 7.03 | 3.14 | 0.79 | -2.41 | -- | 6.2 | 0.166 | 2.12 | 24.86 | 1039 | -- | -- |
| 261.91 | 0.754 | 7.13 | 1.42 | 0.76 | -1.58 | -- | -- | 0.0688 | 2.7 | 23.77 | 1109 | -- | -- |
| 265.33 | 0.759 | 7.03 | 2.47 | -- | -2.25 | -- | 4.89 | 0.258 | -- | 21.96 | 400 | -- | -- |
| 339.38 | 0.864 | 7.19 | 1.21 | 0.62 | -- | -1.66 | -- | -0.328 | 5.85 | -- | -- | -- | -- |
| 342.93 | 0.867 | 7.19 | 1.2 | 0.65 | -- | -- | -- | -0.324 | 4.48 | -- | -- | -- | -- |
| 272.43 | 0.769 | 7.13 | 1.61 | -- | -1.88 | -- | -- | -0.00635 | -- | 21.1 | 257 | -- | -- |
| 325.08 | 0.84 | 7.22 | -- | 0.807 | -1.27 | -- | -- | -0.434 | 3.15 | 25.99 | 1088 | -- | -- |
| 365.54 | 0.893 | 7.2 | 1.22 | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
| 380.57 | 0.913 | 7.22 | -- | 0.673 | -- | -- | -- | -0.457 | 4.44 | -- | -- | -- | -- |
| 337.75 | 0.856 | 7.18 | -- | -- | -1.55 | -- | -- | -0.233 | -- | 21.58 | 268 | -- | -- |
| 404.82 | 0.939 | 7.23 | -- | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 2 | 249.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 3 | 249.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 18 |
| 7 | 249.23 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 14 | 249.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 17 |
| 42 | 250.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 48 | 250.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 64 | 250.97 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 83 | 251.07 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 86 | 251.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 149 | 251.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 164 | 251.82 | temperature | 25 | 1440 | > th | dose dependent | sin | 1 | NA |
| 172 | 251.89 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 485 | 254.51 | temperature | 10 | 720 | > th | dose dependent | sin | 23 | NA |
| 788 | 258.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 832 | 259.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 841 | 259.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 846 | 259.26 | temperature | 25 | 720 | > th | dose dependent | sin | 9 | NA |