Os04g0383700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0383700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.17 | 0.675 | 3.54 | -0.658 | 0.287 | -1.18 | -2.28 | 1.85 | 0.0994 | 19 | 10.1 | 1545 | -- | -- |
| 208.19 | 0.672 | 3.6 | -1.01 | 0.266 | -1.08 | -2.32 | -- | -0.00225 | 19.2 | 12.69 | 2759 | -- | -- |
| 219.3 | 0.69 | 3.54 | -0.577 | 0.298 | -1.18 | -- | 2.03 | 0.105 | 17.9 | 9.646 | 1546 | -- | -- |
| 222.58 | 0.695 | 3.6 | -0.963 | 0.261 | -1.07 | -- | -- | -0.00933 | 18.9 | 12.35 | 2760 | -- | -- |
| 223.28 | 0.696 | 3.54 | -0.589 | -- | -1.2 | -- | 2.01 | 0.0989 | -- | 12.33 | 1385 | -- | -- |
| 231.84 | 0.714 | 3.65 | -1.44 | 0.292 | -- | -2.35 | -- | -0.224 | 19 | -- | -- | -- | -- |
| 245.63 | 0.734 | 3.65 | -1.39 | 0.306 | -- | -- | -- | -0.228 | 17.7 | -- | -- | -- | -- |
| 226.13 | 0.7 | 3.59 | -0.958 | -- | -1.09 | -- | -- | -0.00949 | -- | 13.37 | 2805 | -- | -- |
| 231.5 | 0.709 | 3.5 | -- | 0.294 | -1.48 | -- | -- | 0.418 | 18.3 | -0.7494 | 15511 | -- | -- |
| 250.5 | 0.74 | 3.64 | -1.4 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 296.91 | 0.806 | 3.61 | -- | 0.329 | -- | -- | -- | -0.0722 | 17.5 | -- | -- | -- | -- |
| 235.85 | 0.715 | 3.5 | -- | -- | -1.48 | -- | -- | 0.416 | -- | -0.6429 | 15666 | -- | -- |
| 302.52 | 0.812 | 3.61 | -- | -- | -- | -- | -- | -0.079 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.13 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 3 | 197.42 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 16 |
| 13 | 199.60 | temperature | 30.0 | 90 | < th | dose dependent | sin | 18 | NA |
| 15 | 199.78 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 18 |
| 17 | 199.96 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 8 | 16 |
| 33 | 200.81 | temperature | 10.0 | 90 | > th | dose dependent | sin | 17 | NA |
| 60 | 201.65 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 83 | 202.17 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 103 | 202.75 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 111 | 202.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 112 | 202.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 135 | 203.11 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 16 |
| 137 | 203.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 141 | 203.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 144 | 203.27 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 151 | 203.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 155 | 203.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 156 | 203.33 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 157 | 203.33 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 167 | 203.42 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 174 | 203.51 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 188 | 203.65 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 191 | 203.67 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 205 | 203.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 16 |
| 209 | 203.89 | temperature | 10.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 213 | 203.91 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 225 | 203.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 235 | 204.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 239 | 204.07 | temperature | 30.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 254 | 204.20 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 268 | 204.30 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 275 | 204.35 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 288 | 204.45 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 307 | 204.59 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 321 | 204.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 322 | 204.64 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 325 | 204.66 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 330 | 204.66 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 342 | 204.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 349 | 204.70 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 361 | 204.75 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 362 | 204.76 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 365 | 204.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 370 | 204.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 392 | 204.85 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 398 | 204.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 401 | 204.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 404 | 204.89 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 418 | 204.97 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 425 | 205.02 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 427 | 205.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 431 | 205.03 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 436 | 205.05 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 442 | 205.07 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 443 | 205.07 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 453 | 205.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 454 | 205.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 455 | 205.13 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 474 | 205.16 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 476 | 205.17 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 499 | 205.25 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 512 | 205.29 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 584 | 205.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 613 | 205.55 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 616 | 205.55 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 19 |
| 619 | 205.56 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 644 | 205.59 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 666 | 205.64 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 15 |
| 686 | 205.67 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 9 | 6 |
| 741 | 205.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 866 | 205.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 906 | 205.98 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 908 | 205.98 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 917 | 206.00 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 934 | 206.02 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 946 | 206.02 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 961 | 206.04 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 962 | 206.04 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 966 | 206.04 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 982 | 206.06 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 13 |
| 983 | 206.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 995 | 206.06 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 13 |