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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0381500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0268) R2 : 0.00799
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.108 (0.0565) R2dN8 : 0.0103 R2N8 : 0.00799
σ : 0.505
deviance : 117.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
112.11 0.493 2.99 0.11 0.125 -0.327 -0.417 0.0758 0.114 5.51 1010 10 -- --
112.12 0.497 2.99 0.104 0.126 -0.33 -0.418 -- 0.113 5.56 1010 10 -- --
112.48 0.498 2.98 0.11 0.126 -0.328 -- 0.092 0.116 6.39 1010 10 -- --
112.5 0.497 2.98 0.103 0.127 -0.33 -- -- 0.115 6.38 1010 10 -- --
113.29 0.498 2.99 0.115 -- -0.346 -- 0.102 0.119 -- 1010 10 -- --
115.37 0.504 2.98 0.092 0.155 -- -0.439 -- 0.113 6.04 -- -- -- --
115.77 0.504 2.98 0.0891 0.157 -- -- -- 0.116 6.91 -- -- -- --
113.33 0.498 2.99 0.107 -- -0.349 -- -- 0.118 -- 1010 10 -- --
112.78 0.497 2.99 -- 0.129 -0.326 -- -- 0.104 6.34 1010 10 -- --
117.06 0.506 2.99 0.0924 -- -- -- -- 0.119 -- -- -- -- --
115.98 0.504 2.98 -- 0.158 -- -- -- 0.106 6.87 -- -- -- --
113.63 0.498 2.99 -- -- -0.345 -- -- 0.106 -- 1010 10 -- --
117.29 0.505 2.99 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.98 radiation 10.0 10 > th dose independent rect. 6 1
27 107.98 radiation 10.0 10 > th dose dependent rect. 6 1
57 109.59 atmosphere 1005.0 30 > th dose dependent rect. 2 5
58 109.67 atmosphere 1010.0 10 < th dose independent rect. 3 23
61 110.02 atmosphere 1010.0 10 < th dose independent sin 6 NA
65 110.15 wind 1.0 10 < th dose independent rect. 6 1
76 110.93 atmosphere 1010.0 10 < th dose independent rect. 3 12
90 111.06 wind 3.0 10 < th dose dependent rect. 6 1
92 111.10 radiation 10.0 10 < th dose dependent rect. 6 1
96 111.28 atmosphere 1005.0 270 > th dose dependent rect. 2 1
97 111.29 radiation 1.0 4320 < th dose dependent rect. 3 1
99 111.30 wind 9.0 1440 < th dose independent rect. 3 1
100 111.30 temperature 10.0 1440 > th dose independent rect. 3 1
103 111.30 temperature 30.0 1440 < th dose independent rect. 3 1
107 111.30 humidity 50.0 1440 > th dose independent rect. 3 1
116 111.30 atmosphere 995.0 1440 > th dose independent rect. 3 1
117 111.30 radiation 1.0 1440 < th dose independent rect. 3 1
137 111.30 temperature 10.0 1440 > th dose independent rect. 4 23
156 111.31 temperature 20.0 30 > th dose dependent rect. 2 1
157 111.32 atmosphere 1010.0 10 < th dose independent rect. 3 7
158 111.32 atmosphere 1005.0 30 > th dose dependent rect. 2 1
161 111.34 wind 3.0 30 < th dose independent rect. 2 1
162 111.34 temperature 20.0 30 > th dose independent rect. 2 1
163 111.34 atmosphere 1005.0 30 > th dose independent rect. 2 1
164 111.34 wind 5.0 30 < th dose dependent rect. 2 1
175 111.37 temperature 10.0 30 > th dose independent rect. 2 1
177 111.37 temperature 30.0 30 < th dose independent rect. 2 1
178 111.37 humidity 50.0 30 > th dose independent rect. 2 1
184 111.37 atmosphere 1010.0 30 < th dose independent rect. 2 1
186 111.37 radiation 1.0 30 < th dose independent rect. 2 1
191 111.37 precipitation 0.1 30 < th dose independent rect. 2 1
192 111.37 temperature 10.0 30 > th dose independent rect. 3 23
193 111.37 humidity 50.0 30 > th dose dependent rect. 2 1
197 111.37 radiation 1.0 30 < th dose dependent rect. 2 1
202 111.37 precipitation 0.1 30 < th dose dependent rect. 2 1
208 111.43 atmosphere 1015.0 30 < th dose dependent rect. 2 1
211 111.47 temperature 30.0 30 < th dose dependent rect. 2 1
216 111.49 wind 1.0 30 > th dose independent rect. 2 1
217 111.50 atmosphere 1005.0 10 > th dose dependent rect. 6 1
237 111.61 atmosphere 995.0 30 > th dose independent rect. 3 23
238 111.62 precipitation 0.1 30 < th dose independent rect. 3 23
239 111.62 precipitation 0.1 30 < th dose dependent rect. 3 23
247 111.66 wind 9.0 30 < th dose independent rect. 3 23
291 111.88 atmosphere 1010.0 10 < th dose independent rect. 24 10
300 111.97 precipitation 0.1 720 < th dose independent rect. 19 8
301 111.97 precipitation 0.1 720 < th dose dependent rect. 19 8
303 111.98 humidity 80.0 30 > th dose dependent rect. 6 1
307 112.00 atmosphere 1010.0 10 < th dose independent rect. 16 23
308 112.01 wind 9.0 720 < th dose independent rect. 19 8
309 112.01 precipitation 0.1 720 < th dose independent rect. 7 8
312 112.01 precipitation 0.1 720 < th dose dependent rect. 7 8
327 112.06 atmosphere 1010.0 10 < th dose independent rect. 3 14
329 112.08 atmosphere 1010.0 10 < th dose independent rect. 22 12
330 112.08 atmosphere 1010.0 10 < th dose independent rect. 3 16
332 112.11 atmosphere 1010.0 10 < th dose independent no NA NA
334 112.13 temperature 10.0 720 > th dose independent rect. 7 8
335 112.13 temperature 10.0 720 > th dose independent rect. 19 8
336 112.13 temperature 30.0 720 < th dose independent rect. 19 8
337 112.13 humidity 50.0 720 > th dose independent rect. 19 8
338 112.13 atmosphere 995.0 720 > th dose independent rect. 19 8
339 112.13 atmosphere 1015.0 720 < th dose independent rect. 7 8
340 112.13 radiation 1.0 720 < th dose independent rect. 19 8
345 112.13 temperature 10.0 720 > th dose independent rect. 3 16
346 112.13 temperature 10.0 720 > th dose independent rect. 15 16
347 112.13 radiation 1.0 720 < th dose dependent rect. 19 8
359 112.24 atmosphere 1010.0 10 < th dose independent rect. 20 14
364 112.27 atmosphere 995.0 720 > th dose independent rect. 7 8
365 112.27 atmosphere 1010.0 10 < th dose independent rect. 11 23
366 112.28 temperature 30.0 30 < th dose dependent rect. 6 1
374 112.35 atmosphere 1015.0 720 < th dose independent rect. 3 16
375 112.35 precipitation 0.1 720 < th dose independent rect. 3 16
376 112.35 precipitation 0.1 720 < th dose dependent rect. 3 16
381 112.38 temperature 20.0 30 > th dose dependent rect. 2 5
389 112.46 atmosphere 995.0 720 > th dose independent rect. 15 16
394 112.48 atmosphere 995.0 720 > th dose independent rect. 3 16
400 112.52 temperature 25.0 90 < th dose independent rect. 6 1
403 112.53 atmosphere 1010.0 10 < th dose independent rect. 24 15
404 112.57 atmosphere 1010.0 10 < th dose independent rect. 3 20
415 112.64 wind 3.0 30 < th dose dependent rect. 2 5
421 112.66 precipitation 0.1 720 < th dose independent rect. 15 16
424 112.66 precipitation 0.1 720 < th dose dependent rect. 15 16
433 112.70 temperature 25.0 720 > th dose dependent rect. 4 4
438 112.72 radiation 40.0 720 < th dose independent rect. 15 16
441 112.73 atmosphere 1010.0 10 < th dose independent rect. 20 23
448 112.76 atmosphere 1010.0 10 < th dose independent rect. 3 18
453 112.77 atmosphere 1010.0 10 < th dose independent rect. 16 18
461 112.81 humidity 50.0 30 > th dose independent rect. 3 23
470 112.85 temperature 25.0 720 > th dose independent rect. 3 6
475 112.86 humidity 50.0 720 > th dose independent rect. 7 8
476 112.86 atmosphere 1010.0 10 < th dose independent rect. 18 16
480 112.88 atmosphere 1010.0 10 < th dose independent rect. 24 13
483 112.89 wind 9.0 720 < th dose independent rect. 7 8
485 112.90 humidity 90.0 90 < th dose independent rect. 1 6
487 112.91 atmosphere 1010.0 10 < th dose independent rect. 14 23
493 112.93 atmosphere 1010.0 10 < th dose independent rect. 24 23
498 112.95 radiation 10.0 30 < th dose independent rect. 3 23
533 113.05 wind 9.0 720 < th dose independent rect. 15 16
538 113.05 wind 3.0 10 < th dose dependent rect. 6 21
541 113.06 wind 1.0 10 < th dose independent rect. 6 21
542 113.06 radiation 10.0 30 < th dose dependent rect. 3 23
574 113.13 atmosphere 1005.0 90 > th dose dependent rect. 1 10
580 113.15 atmosphere 1010.0 10 < th dose independent rect. 8 23
591 113.16 temperature 10.0 30 > th dose dependent rect. 3 23
592 113.17 atmosphere 1010.0 10 < th dose independent rect. 14 20
610 113.23 atmosphere 1010.0 10 < th dose independent rect. 24 19
620 113.25 wind 3.0 270 > th dose independent rect. 3 1
622 113.26 temperature 25.0 270 > th dose independent rect. 23 4
628 113.27 atmosphere 1005.0 30 > th dose independent rect. 2 5
657 113.32 atmosphere 1005.0 10 > th dose dependent rect. 2 10
661 113.33 wind 9.0 30 < th dose independent rect. 7 23
664 113.34 wind 9.0 4320 < th dose independent rect. 7 1
668 113.34 atmosphere 995.0 30 > th dose independent rect. 7 23
688 113.38 atmosphere 1010.0 10 < th dose independent rect. 24 17
691 113.39 temperature 25.0 720 > th dose independent rect. 7 1
692 113.39 atmosphere 1010.0 1440 > th dose independent rect. 7 1
697 113.40 temperature 10.0 1440 > th dose independent rect. 7 1
701 113.40 temperature 30.0 1440 < th dose independent rect. 7 1
705 113.40 humidity 50.0 1440 > th dose independent rect. 7 1
710 113.40 atmosphere 995.0 1440 > th dose independent rect. 7 1
711 113.40 atmosphere 1015.0 1440 < th dose independent rect. 7 1
713 113.40 wind 1.0 10 < th dose independent rect. 23 4
717 113.40 temperature 10.0 1440 > th dose independent rect. 8 23
737 113.41 humidity 90.0 30 < th dose independent rect. 6 1
738 113.41 atmosphere 1005.0 30 > th dose independent rect. 6 1
748 113.42 temperature 25.0 10 > th dose independent rect. 6 1
750 113.42 humidity 80.0 30 > th dose independent rect. 6 1
759 113.42 temperature 10.0 30 > th dose dependent rect. 7 19
760 113.43 wind 1.0 30 > th dose independent rect. 6 1
764 113.43 temperature 10.0 30 > th dose independent rect. 6 1
767 113.43 humidity 50.0 30 > th dose independent rect. 6 1
771 113.43 atmosphere 995.0 30 > th dose independent rect. 6 1
773 113.43 atmosphere 1015.0 30 < th dose independent rect. 6 1
774 113.43 atmosphere 1010.0 720 < th dose independent rect. 22 1
775 113.43 radiation 20.0 30 < th dose independent rect. 6 1
778 113.43 precipitation 0.1 30 < th dose independent rect. 6 1
781 113.43 temperature 10.0 30 > th dose independent rect. 7 23
782 113.43 precipitation 0.1 30 < th dose dependent rect. 6 1
791 113.44 wind 1.0 10 > th dose independent rect. 7 23
792 113.44 temperature 30.0 30 < th dose independent rect. 3 23
793 113.44 precipitation 0.1 30 < th dose independent rect. 7 23
794 113.44 temperature 25.0 30 > th dose dependent sin 10 NA
799 113.44 precipitation 0.1 30 < th dose dependent rect. 7 23
801 113.45 wind 1.0 10 < th dose independent rect. 14 13
805 113.45 atmosphere 1010.0 10 < th dose independent rect. 22 17
815 113.46 temperature 25.0 720 < th dose independent rect. 2 9
819 113.47 radiation 10.0 30 > th dose independent sin 10 NA
830 113.47 atmosphere 1010.0 10 < th dose independent rect. 20 19
842 113.49 temperature 25.0 720 > th dose independent rect. 3 12
846 113.50 temperature 25.0 720 < th dose independent rect. 4 8
849 113.50 temperature 25.0 90 > th dose independent rect. 3 22