Os04g0380000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0380000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.21 | 0.451 | 8.6 | 0.93 | 1.07 | 0.546 | 1.75 | 2.24 | 0.357 | 22.2 | 60.77 | 669 | -- | -- |
| 96.55 | 0.458 | 8.58 | 0.974 | 1.04 | 0.781 | 1.44 | -- | 0.336 | 22.3 | 61 | 564 | -- | -- |
| 102.73 | 0.472 | 8.6 | 0.857 | 1.03 | 0.569 | -- | 1.79 | 0.359 | 22.2 | 61 | 562 | -- | -- |
| 104.83 | 0.477 | 8.58 | 0.898 | 1.04 | 0.746 | -- | -- | 0.341 | 22.2 | 60.43 | 566 | -- | -- |
| 161.29 | 0.595 | 8.54 | 0.866 | -- | 0.3 | -- | 1.17 | 0.407 | -- | 62 | 3058 | -- | -- |
| 108.71 | 0.489 | 8.55 | 0.872 | 0.931 | -- | 1.31 | -- | 0.431 | 23.1 | -- | -- | -- | -- |
| 116.05 | 0.504 | 8.56 | 0.819 | 0.925 | -- | -- | -- | 0.427 | 23 | -- | -- | -- | -- |
| 160.89 | 0.591 | 8.56 | 0.845 | -- | 0.725 | -- | -- | 0.298 | -- | 62.82 | 4551 | -- | -- |
| 125.86 | 0.523 | 8.6 | -- | 0.997 | 0.615 | -- | -- | 0.27 | 22.4 | 59.98 | 561 | -- | -- |
| 169.37 | 0.608 | 8.53 | 0.84 | -- | -- | -- | -- | 0.434 | -- | -- | -- | -- | -- |
| 133.71 | 0.541 | 8.58 | -- | 0.933 | -- | -- | -- | 0.336 | 23.1 | -- | -- | -- | -- |
| 164.66 | 0.6 | 8.55 | -- | -- | 0.451 | -- | -- | 0.357 | -- | 83.19 | 1617 | -- | -- |
| 187.98 | 0.64 | 8.55 | -- | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.48 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 2 | 89.56 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 3 | 89.57 | radiation | 20 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 4 | 89.57 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 5 | 89.57 | radiation | 30 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 6 | 89.59 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 13 | 89.76 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 14 | 89.77 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 15 | 89.77 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 16 | 89.78 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 35 | 89.81 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 67 | 89.88 | radiation | 10 | 43200 | > th | dose independent | sin | 8 | NA |
| 81 | 89.90 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 103 | 89.94 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 106 | 89.94 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 120 | 89.94 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 133 | 89.96 | radiation | 40 | 43200 | > th | dose independent | sin | 2 | NA |
| 177 | 89.99 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 345 | 90.04 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 346 | 90.05 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 435 | 90.12 | radiation | 30 | 43200 | > th | dose independent | rect. | 14 | 1 |