Os04g0375900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os04g0375900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346.51 | 0.875 | 4.18 | -1.71 | 0.536 | 1.6 | 0.841 | -7.65 | -0.00138 | 19.4 | 26.22 | 4467 | -- | -- |
| 356.4 | 0.879 | 4.06 | -0.365 | 0.554 | 1.07 | 0.485 | -- | -0.0501 | 19.7 | 17.28 | 7334 | -- | -- |
| 348.09 | 0.869 | 4.17 | -1.71 | 0.538 | 1.63 | -- | -7.81 | 0.0253 | 19.8 | 26.5 | 4441 | -- | -- |
| 357.5 | 0.881 | 4.04 | -0.313 | 0.554 | 0.991 | -- | -- | -0.00148 | 19.8 | 17.9 | 7345 | -- | -- |
| 361.16 | 0.885 | 4.16 | -1.77 | -- | 1.63 | -- | -7.69 | 0.0136 | -- | 26.67 | 4961 | -- | -- |
| 379.72 | 0.914 | 3.96 | 0.278 | 0.564 | -- | 0.81 | -- | 0.324 | 19.6 | -- | -- | -- | -- |
| 381.34 | 0.914 | 3.96 | 0.255 | 0.563 | -- | -- | -- | 0.324 | 20 | -- | -- | -- | -- |
| 362.64 | 0.887 | 4.01 | -0.0256 | -- | 1.22 | -- | -- | 0.0842 | -- | 20.77 | 615 | -- | -- |
| 358.99 | 0.882 | 4.02 | -- | 0.58 | 0.825 | -- | -- | 0.0625 | 19.8 | 19.07 | 7338 | -- | -- |
| 398.65 | 0.933 | 3.95 | 0.25 | -- | -- | -- | -- | 0.317 | -- | -- | -- | -- | -- |
| 383.06 | 0.916 | 3.97 | -- | 0.561 | -- | -- | -- | 0.295 | 20.1 | -- | -- | -- | -- |
| 362.44 | 0.887 | 3.99 | -- | -- | 1.18 | -- | -- | 0.116 | -- | 20.38 | 633 | -- | -- |
| 400.3 | 0.934 | 3.95 | -- | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 341.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 2 | 342.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 4 | 342.68 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 6 | 343.02 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 7 | 343.16 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 14 | 343.39 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 20 | 343.57 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 28 | 343.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 29 | 343.67 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 36 | 343.70 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 41 | 343.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 106 | 344.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 112 | 344.16 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 16 |
| 200 | 344.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 210 | 344.62 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 215 | 344.65 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 236 | 344.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 322 | 345.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 332 | 345.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 417 | 345.86 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 427 | 345.89 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 444 | 345.93 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 448 | 345.95 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 16 |
| 453 | 345.95 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 19 |
| 512 | 345.97 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 559 | 346.04 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 561 | 346.07 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 674 | 346.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 678 | 346.43 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 681 | 346.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 684 | 346.47 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 691 | 346.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 697 | 346.62 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 740 | 347.02 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 760 | 347.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 842 | 347.62 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 871 | 347.73 | temperature | 25 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 895 | 347.79 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 896 | 347.80 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 11 |
| 902 | 347.81 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 924 | 347.88 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 5 |
| 953 | 347.98 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 955 | 347.98 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 964 | 348.04 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 973 | 348.08 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 974 | 348.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 980 | 348.10 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 985 | 348.12 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 992 | 348.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 993 | 348.14 | temperature | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |