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Os04g0372400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0269) R2 : 0.506
β1 : 1.05 (0.0985) R2dD : 0.128 R2D : 0.0738
β2 : 1.15 (0.0673) R2dC : 0.319 R2C : 0.314
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.481 (0.0574) R2dN8 : 0.102 R2N8 : 0.0488
σ : 0.506
deviance : 116.71
__
_____
C
peak time of C : 3.32
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.05 0.475 12 -0.561 1.12 1.14 1.09 -7.62 0.434 3.36 30.03 1284 -- --
110.65 0.49 11.8 0.934 1.12 0.339 1.21 -- 0.358 2.74 24.09 1475 -- --
105.7 0.479 12 -0.544 1.12 1.14 -- -7.4 0.432 3.5 30.03 1283 -- --
110.35 0.489 11.8 0.915 1.15 0.436 -- -- 0.412 3.44 27.49 2671 -- --
175.9 0.618 12 -0.544 -- 1.14 -- -6.8 0.432 -- 30.03 1283 -- --
113.02 0.498 11.8 1.07 1.15 -- 1.08 -- 0.487 3.2 -- -- -- --
116.71 0.506 11.8 1.05 1.15 -- -- -- 0.481 3.32 -- -- -- --
149.01 0.571 11.8 1.27 -- -0.701 -- -- 0.633 -- 27.49 2671 -- --
109.23 0.487 11.9 -- 1.13 0.933 -- -- 0.0613 3.17 20.7 47520 -- --
191.95 0.647 11.8 1.1 -- -- -- -- 0.511 -- -- -- -- --
145.81 0.565 11.8 -- 1.18 -- -- -- 0.364 3.32 -- -- -- --
181.42 0.627 11.9 -- -- 0.994 -- -- 0.106 -- 19.81 47520 -- --
223.86 0.698 11.8 -- -- -- -- -- 0.389 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 95.74 wind 1 14400 > th dose independent rect. 21 6
3 95.91 humidity 90 14400 < th dose independent rect. 2 1
8 96.70 humidity 60 43200 < th dose dependent rect. 21 13
11 96.78 humidity 60 43200 < th dose dependent rect. 24 10
13 96.79 wind 1 14400 < th dose independent rect. 23 4
17 96.82 wind 1 14400 < th dose independent rect. 21 6
19 96.84 humidity 60 43200 < th dose independent rect. 21 12
21 96.91 humidity 90 14400 < th dose independent rect. 24 1
27 97.10 humidity 90 14400 < th dose independent rect. 24 6
34 97.14 humidity 90 14400 > th dose dependent rect. 5 1
39 97.23 humidity 60 43200 > th dose independent rect. 22 11
46 97.28 humidity 90 14400 < th dose independent rect. 24 4
56 97.43 humidity 90 14400 < th dose independent rect. 2 4
73 97.57 humidity 90 14400 > th dose independent rect. 2 1
77 97.60 wind 1 14400 > th dose independent rect. 16 11
80 97.64 humidity 60 43200 < th dose dependent sin 8 NA
93 97.73 humidity 90 14400 < th dose independent rect. 5 1
110 97.82 humidity 50 43200 < th dose independent rect. 19 17
112 97.84 humidity 50 43200 > th dose independent rect. 19 17
113 97.85 humidity 90 14400 > th dose independent rect. 4 1
125 97.90 humidity 50 43200 > th dose independent sin 9 NA
128 97.91 humidity 50 43200 < th dose independent sin 9 NA
129 97.91 wind 1 14400 < th dose dependent rect. 20 7
130 97.92 humidity 50 43200 < th dose independent rect. 3 9
146 97.95 humidity 60 43200 > th dose independent rect. 3 6
150 97.97 humidity 50 43200 > th dose independent rect. 3 9
153 97.99 humidity 50 43200 > th dose independent rect. 1 11
159 98.02 humidity 50 43200 > th dose independent rect. 23 13
179 98.12 radiation 20 14400 > th dose independent rect. 6 1
202 98.16 wind 1 14400 < th dose independent rect. 16 11
218 98.20 wind 1 14400 < th dose dependent rect. 23 4
219 98.21 wind 1 43200 < th dose independent rect. 9 1
233 98.29 wind 1 14400 < th dose dependent rect. 7 1
234 98.31 humidity 90 14400 > th dose independent rect. 2 3
262 98.47 radiation 1 43200 < th dose independent rect. 18 11
264 98.48 humidity 50 43200 < th dose independent rect. 10 2
271 98.51 wind 1 43200 > th dose independent rect. 9 1
272 98.51 humidity 60 43200 > th dose independent rect. 8 1
275 98.54 radiation 1 43200 < th dose independent rect. 18 1
277 98.54 radiation 1 43200 < th dose independent rect. 18 9
281 98.55 radiation 1 43200 < th dose independent rect. 18 7
289 98.57 radiation 1 43200 > th dose independent rect. 18 11
306 98.62 humidity 50 43200 < th dose dependent rect. 17 22
333 98.66 humidity 50 43200 < th dose dependent rect. 13 23
334 98.67 radiation 1 43200 > th dose independent rect. 18 1
347 98.69 humidity 50 43200 > th dose independent rect. 17 23
355 98.70 wind 1 14400 > th dose independent rect. 5 22
403 98.77 humidity 50 43200 < th dose independent rect. 17 20
408 98.78 wind 1 14400 < th dose dependent rect. 20 12
424 98.80 humidity 50 43200 > th dose independent rect. 13 23
425 98.80 humidity 50 43200 < th dose dependent no NA NA
436 98.80 humidity 50 43200 < th dose dependent rect. 3 19
456 98.81 humidity 50 43200 < th dose dependent rect. 4 16
476 98.81 humidity 50 43200 < th dose dependent rect. 6 23
508 98.83 wind 1 14400 > th dose independent sin 13 NA
565 98.86 humidity 50 43200 > th dose independent rect. 3 13
611 98.90 humidity 50 43200 > th dose independent rect. 3 19
616 98.90 wind 1 14400 < th dose dependent sin 12 NA
622 98.91 humidity 50 43200 > th dose independent no NA NA
636 98.91 humidity 50 43200 > th dose independent rect. 23 23
659 98.92 humidity 50 43200 > th dose independent rect. 17 20
670 98.93 wind 1 43200 < th dose independent rect. 22 1
678 98.93 humidity 50 43200 > th dose independent rect. 7 23
708 98.95 wind 1 14400 < th dose dependent rect. 22 8
732 98.97 wind 1 14400 > th dose independent rect. 12 20
737 98.97 wind 1 14400 > th dose independent rect. 10 22
745 98.97 radiation 10 43200 < th dose dependent rect. 18 9
754 98.98 wind 1 14400 > th dose independent rect. 17 16
763 98.98 temperature 15 720 > th dose dependent rect. 18 5
773 98.99 wind 1 14400 > th dose independent rect. 15 18
808 99.01 humidity 50 43200 > th dose independent rect. 14 2
813 99.01 radiation 10 43200 < th dose dependent rect. 18 1
841 99.03 radiation 1 43200 < th dose dependent rect. 23 6
952 99.14 wind 1 14400 < th dose independent rect. 18 15
973 99.16 wind 1 43200 < th dose dependent rect. 23 1
985 99.17 humidity 80 43200 < th dose independent rect. 17 4
997 99.18 wind 1 14400 < th dose independent rect. 20 13
999 99.18 wind 1 14400 < th dose independent rect. 5 22