Os04g0372100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os04g0372100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.96 | 0.519 | 2.89 | -0.466 | 0.0372 | 1.02 | 0.425 | -8.36 | 0.0453 | 5.74 | 30.7 | 26 | -- | -- |
| 128.21 | 0.527 | 2.83 | 0.0668 | 0.00543 | 0.947 | -0.374 | -- | 0.0572 | 17 | 35.4 | 26 | -- | -- |
| 122.32 | 0.519 | 2.89 | -0.443 | 0.0433 | 1.01 | -- | -8.42 | 0.0425 | 7.97 | 30.7 | 26 | -- | -- |
| 128.4 | 0.528 | 2.84 | 0.0704 | 0.0496 | 1.14 | -- | -- | 0.0286 | 8.52 | 35.05 | 18 | -- | -- |
| 122.42 | 0.518 | 2.89 | -0.444 | -- | 1.01 | -- | -8.47 | 0.0426 | -- | 30.7 | 26 | -- | -- |
| 129.41 | 0.533 | 2.84 | 0.0726 | 0.00728 | -- | 0.41 | -- | 0.0283 | 5.23 | -- | -- | -- | -- |
| 129.65 | 0.533 | 2.84 | 0.074 | 0.0542 | -- | -- | -- | 0.0268 | 10.4 | -- | -- | -- | -- |
| 128.54 | 0.528 | 2.84 | 0.0703 | -- | 1.14 | -- | -- | 0.0295 | -- | 35.05 | 21 | -- | -- |
| 128.52 | 0.528 | 2.84 | -- | 0.0504 | 1.14 | -- | -- | 0.0216 | 9.62 | 35.05 | 50 | -- | -- |
| 129.83 | 0.532 | 2.84 | 0.0732 | -- | -- | -- | -- | 0.0266 | -- | -- | -- | -- | -- |
| 129.8 | 0.533 | 2.84 | -- | 0.0538 | -- | -- | -- | 0.0186 | 10.3 | -- | -- | -- | -- |
| 128.67 | 0.528 | 2.84 | -- | -- | 1.15 | -- | -- | 0.0218 | -- | 35.06 | 49 | -- | -- |
| 129.97 | 0.532 | 2.84 | -- | -- | -- | -- | -- | 0.0185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.90 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 115.05 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 3 | 115.24 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 6 | 115.26 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 31 | 120.03 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 34 | 120.11 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 48 | 120.17 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 11 | 2 |
| 65 | 120.63 | temperature | 30.0 | 270 | > th | dose independent | rect. | 10 | 2 |
| 67 | 120.65 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 19 |
| 69 | 120.70 | temperature | 30.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 110 | 120.83 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 112 | 120.84 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 180 | 121.09 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 211 | 121.12 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 213 | 121.13 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 267 | 121.30 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 293 | 121.47 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 303 | 121.62 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 310 | 121.77 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 317 | 121.84 | temperature | 20.0 | 30 | < th | dose independent | rect. | 5 | 7 |
| 337 | 121.88 | temperature | 20.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 529 | 122.50 | temperature | 30.0 | 90 | > th | dose independent | sin | 8 | NA |
| 580 | 122.59 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 3 |
| 581 | 122.59 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 588 | 122.66 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 1 |
| 591 | 122.66 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 617 | 122.74 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 657 | 122.80 | temperature | 30.0 | 270 | < th | dose independent | sin | 9 | NA |
| 717 | 123.06 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 9 |
| 733 | 123.10 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 8 |
| 769 | 123.21 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 770 | 123.21 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 805 | 123.33 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 814 | 123.38 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 839 | 123.46 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 7 |
| 843 | 123.46 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 878 | 123.56 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 897 | 123.60 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 928 | 123.63 | temperature | 20.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 950 | 123.72 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 11 |
| 964 | 123.76 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 971 | 123.79 | wind | 7.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 973 | 123.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 976 | 123.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 980 | 123.79 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 985 | 123.79 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 987 | 123.79 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 988 | 123.79 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 993 | 123.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 996 | 123.80 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 8 |