Os04g0370100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0370100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324.32 | 0.846 | 5.61 | 0.011 | 0.745 | 1.99 | -0.0867 | -4.25 | -2.58 | 0.425 | 21.22 | 4782 | -- | -- |
| 328.65 | 0.844 | 5.52 | 0.417 | 0.71 | 2.52 | -0.554 | -- | -2.68 | 0.805 | 15.48 | 10724 | -- | -- |
| 324.34 | 0.839 | 5.61 | 0.0131 | 0.746 | 1.99 | -- | -4.27 | -2.58 | 0.373 | 21.28 | 4780 | -- | -- |
| 326.53 | 0.842 | 5.54 | 0.548 | 0.718 | 2.49 | -- | -- | -2.69 | 0.0603 | 14.6 | 10732 | -- | -- |
| 351.37 | 0.873 | 5.6 | -0.0249 | -- | 2.15 | -- | -4.45 | -2.64 | -- | 20.1 | 3939 | -- | -- |
| 432.47 | 0.975 | 5.35 | 2.07 | 0.813 | -- | 0.1 | -- | -1.88 | 0.0936 | -- | -- | -- | -- |
| 432.51 | 0.974 | 5.35 | 2.06 | 0.813 | -- | -- | -- | -1.88 | 0.149 | -- | -- | -- | -- |
| 357.58 | 0.881 | 5.53 | 0.621 | -- | 2.54 | -- | -- | -2.7 | -- | 14.9 | 9642 | -- | -- |
| 330.38 | 0.847 | 5.57 | -- | 0.716 | 2.84 | -- | -- | -2.84 | 23.9 | 9.124 | 11226 | -- | -- |
| 474.08 | 1.02 | 5.34 | 2.09 | -- | -- | -- | -- | -1.87 | -- | -- | -- | -- | -- |
| 544.69 | 1.09 | 5.41 | -- | 0.841 | -- | -- | -- | -2.11 | 0.284 | -- | -- | -- | -- |
| 361.33 | 0.885 | 5.56 | -- | -- | 2.94 | -- | -- | -2.84 | -- | 8.119 | 11002 | -- | -- |
| 589.22 | 1.13 | 5.39 | -- | -- | -- | -- | -- | -2.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.58 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 2 | 320.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 5 | 321.23 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 7 | 321.54 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 11 | 321.92 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 15 | 322.16 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 46 | 323.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 18 |
| 155 | 325.17 | temperature | 20 | 4320 | > th | dose dependent | sin | 5 | NA |
| 162 | 325.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 16 |
| 166 | 325.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 171 | 325.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 22 |
| 219 | 325.49 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 243 | 325.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 20 |
| 327 | 326.11 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 382 | 326.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 13 |
| 409 | 326.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 413 | 326.57 | wind | 9 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 429 | 326.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 452 | 326.74 | humidity | 90 | 14400 | > th | dose dependent | sin | 17 | NA |
| 521 | 327.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 544 | 327.09 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 561 | 327.19 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 579 | 327.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 588 | 327.34 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 593 | 327.38 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 624 | 327.49 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 660 | 327.61 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 13 |
| 722 | 327.97 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 737 | 328.03 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 770 | 328.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 775 | 328.27 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 831 | 328.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 842 | 328.55 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 858 | 328.67 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 876 | 328.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 896 | 328.80 | temperature | 20 | 14400 | > th | dose independent | sin | 17 | NA |
| 906 | 328.83 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 911 | 328.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 952 | 328.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |