Os04g0365100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wall-associated kinase 4.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0365100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Wall-associated kinase 4.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 415.29 | 0.957 | 5.12 | -2.13 | 1.32 | 2.25 | 0.757 | -5 | 0.331 | 3.95 | 20.01 | 2685 | 3.56 | -- |
| 458.42 | 0.997 | 4.89 | -1.13 | 1.09 | 3 | 0.393 | -- | 0.669 | 4.36 | 19.17 | 3002 | 3.49 | -- |
| 416.19 | 0.95 | 5.12 | -2.08 | 1.27 | 2.22 | -- | -4.87 | 0.348 | 3.88 | 20 | 2676 | 4.5 | -- |
| 454.49 | 0.993 | 4.91 | -1.26 | 1.17 | 3.19 | -- | -- | 0.648 | 4.89 | 19.38 | 3008 | 6.79 | -- |
| 439.51 | 0.976 | 5.12 | -1.85 | -- | 2.62 | -- | -5.44 | 0.319 | -- | 20.5 | 1995 | 5.13 | -- |
| 667.66 | 1.21 | 4.73 | 0.589 | 1.36 | -- | -0.014 | -- | 1.46 | 4.25 | -- | -- | -- | -- |
| 667.66 | 1.21 | 4.73 | 0.589 | 1.36 | -- | -- | -- | 1.46 | 4.25 | -- | -- | -- | -- |
| 458.81 | 0.998 | 4.92 | -1.12 | -- | 3.51 | -- | -- | 0.701 | -- | 19.47 | 2170 | 7.35 | -- |
| 474.99 | 1.02 | 4.94 | -- | 0.941 | 2.78 | -- | -- | 0.79 | 1.89 | 19.54 | 2290 | 4.9 | -- |
| 767.64 | 1.29 | 4.74 | 0.643 | -- | -- | -- | -- | 1.49 | -- | -- | -- | -- | -- |
| 676.8 | 1.22 | 4.74 | -- | 1.37 | -- | -- | -- | 1.39 | 4.24 | -- | -- | -- | -- |
| 479.43 | 1.02 | 4.87 | -- | -- | 3.25 | -- | -- | 0.894 | -- | 19.41 | 2145 | 7.05 | -- |
| 778.56 | 1.3 | 4.75 | -- | -- | -- | -- | -- | 1.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 412.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 3 | 414.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 4 | 414.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 8 | 415.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 9 | 415.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 23 | 419.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 68 | 425.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 174 | 436.86 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 189 | 437.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 199 | 438.26 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 202 | 438.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 214 | 439.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 223 | 439.40 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 297 | 442.03 | temperature | 20 | 4320 | < th | dose independent | sin | 12 | NA |
| 348 | 443.62 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 411 | 445.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 434 | 446.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 475 | 447.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 476 | 447.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 493 | 447.64 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 550 | 448.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 604 | 449.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 664 | 450.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 13 |
| 710 | 451.66 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 743 | 452.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 799 | 452.92 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 860 | 453.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 896 | 454.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 984 | 455.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 987 | 455.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |