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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0356600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.82 (0.0252) R2 : 0.0259
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.184 (0.053) R2dN8 : 0.0334 R2N8 : 0.0259
σ : 0.474
deviance : 103.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.13 0.47 2.84 -0.182 0.134 -0.645 0.134 3.35 0.197 10.9 1000 701 -- --
101.92 0.47 2.81 -0.00279 0.121 -0.178 0.233 -- 0.182 11 996.2 1049 -- --
100.17 0.466 2.84 -0.178 0.136 -0.643 -- 3.34 0.196 10.2 1000 693 -- --
101.58 0.469 2.81 0.0153 0.122 -0.294 -- -- 0.194 9.94 996.3 3597 -- --
101.29 0.469 2.85 -0.168 -- -0.604 -- 3.17 0.196 -- 1000 693 -- --
102.06 0.474 2.81 0.0111 0.113 -- 0.232 -- 0.187 11.3 -- -- -- --
102.18 0.473 2.81 0.0191 0.121 -- -- -- 0.186 9.92 -- -- -- --
102.44 0.471 2.81 0.0259 -- -0.303 -- -- 0.196 -- 996.3 3597 -- --
101.59 0.469 2.81 -- 0.12 -0.297 -- -- 0.193 9.97 996.3 3616 -- --
103.07 0.474 2.82 0.0177 -- -- -- -- 0.186 -- -- -- -- --
102.19 0.473 2.81 -- 0.121 -- -- -- 0.184 9.91 -- -- -- --
102.46 0.471 2.81 -- -- -0.3 -- -- 0.193 -- 996.3 3616 -- --
103.07 0.474 2.82 -- -- -- -- -- 0.184 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.10 radiation 10.0 10 > th dose independent rect. 6 1
27 93.10 radiation 10.0 10 > th dose dependent rect. 6 1
57 97.19 wind 3.0 30 < th dose dependent rect. 6 1
58 97.20 atmosphere 1005.0 10 > th dose dependent rect. 6 1
61 97.53 wind 1.0 10 > th dose independent rect. 7 23
62 97.71 humidity 80.0 30 > th dose dependent rect. 6 1
64 97.97 temperature 30.0 30 < th dose dependent rect. 6 1
67 98.05 wind 1.0 10 > th dose independent rect. 19 11
71 98.19 radiation 10.0 10 < th dose dependent rect. 6 1
73 98.24 wind 9.0 90 < th dose independent rect. 7 23
83 98.46 radiation 20.0 90 < th dose independent rect. 6 1
86 98.49 wind 1.0 90 > th dose independent rect. 6 1
88 98.50 humidity 80.0 90 > th dose independent rect. 6 1
91 98.53 wind 3.0 30 < th dose independent rect. 6 1
98 98.63 radiation 30.0 90 < th dose dependent rect. 6 1
103 98.66 wind 1.0 90 < th dose dependent rect. 2 1
107 98.74 atmosphere 1000.0 720 > th dose independent rect. 18 1
111 98.76 atmosphere 995.0 90 > th dose independent rect. 7 23
114 98.77 temperature 10.0 90 > th dose independent rect. 6 1
116 98.77 temperature 30.0 90 < th dose independent rect. 6 1
117 98.77 humidity 50.0 90 > th dose independent rect. 6 1
119 98.77 atmosphere 995.0 90 > th dose independent rect. 6 1
121 98.77 atmosphere 1015.0 90 < th dose independent rect. 6 1
123 98.77 precipitation 0.1 90 < th dose independent rect. 6 1
124 98.77 temperature 10.0 90 > th dose independent rect. 7 23
125 98.77 precipitation 0.1 90 < th dose dependent rect. 6 1
132 98.83 wind 9.0 1440 < th dose independent rect. 7 1
133 98.83 temperature 10.0 1440 > th dose independent rect. 7 1
137 98.83 temperature 30.0 1440 < th dose independent rect. 7 1
141 98.83 humidity 50.0 1440 > th dose independent rect. 7 1
146 98.83 atmosphere 995.0 1440 > th dose independent rect. 7 1
147 98.83 atmosphere 1015.0 1440 < th dose independent rect. 7 1
148 98.83 temperature 10.0 1440 > th dose independent rect. 8 23
151 98.83 precipitation 0.1 90 < th dose independent rect. 7 23
154 98.83 precipitation 0.1 90 < th dose dependent rect. 7 23
155 98.84 wind 1.0 90 < th dose independent rect. 2 1
156 98.85 humidity 90.0 30 < th dose independent rect. 6 1
190 98.90 atmosphere 1000.0 720 > th dose independent rect. 7 22
202 98.96 atmosphere 1005.0 30 > th dose dependent rect. 2 5
206 98.98 atmosphere 995.0 4320 > th dose independent rect. 21 13
231 99.01 temperature 10.0 90 > th dose dependent rect. 6 1
234 99.02 atmosphere 1010.0 30 < th dose dependent rect. 6 1
244 99.07 atmosphere 995.0 4320 > th dose independent rect. 21 15
260 99.14 atmosphere 995.0 720 > th dose dependent rect. 18 1
266 99.18 radiation 1.0 90 < th dose independent rect. 3 23
268 99.18 atmosphere 995.0 10 > th dose dependent rect. 19 11
270 99.18 radiation 1.0 90 < th dose dependent rect. 3 23
281 99.21 atmosphere 995.0 4320 > th dose independent rect. 21 6
286 99.22 temperature 20.0 30 > th dose dependent rect. 2 5
287 99.23 atmosphere 995.0 4320 > th dose independent rect. 21 9
299 99.27 atmosphere 1000.0 720 > th dose independent rect. 17 8
317 99.29 wind 9.0 30 < th dose independent rect. 3 23
326 99.32 temperature 20.0 90 > th dose dependent rect. 2 1
330 99.34 atmosphere 1000.0 720 > th dose independent rect. 13 7
332 99.34 wind 3.0 10 < th dose dependent rect. 2 6
335 99.36 atmosphere 1000.0 720 > th dose independent sin 18 NA
369 99.42 wind 7.0 10 < th dose dependent rect. 23 9
370 99.43 atmosphere 1000.0 720 > th dose independent rect. 8 17
372 99.43 atmosphere 1000.0 720 > th dose independent rect. 21 23
375 99.44 atmosphere 1000.0 720 > th dose independent rect. 11 9
376 99.44 wind 1.0 90 > th dose dependent rect. 6 1
385 99.46 radiation 20.0 10 < th dose dependent rect. 6 7
401 99.51 atmosphere 1000.0 720 > th dose independent rect. 23 20
416 99.52 atmosphere 1000.0 720 > th dose independent rect. 8 15
419 99.53 atmosphere 1000.0 720 > th dose independent rect. 13 16
422 99.54 atmosphere 1005.0 10 > th dose independent rect. 19 7
435 99.56 atmosphere 1000.0 720 > th dose independent rect. 1 18
441 99.57 atmosphere 1000.0 720 > th dose independent rect. 11 18
473 99.61 humidity 50.0 30 > th dose independent rect. 6 13
485 99.63 atmosphere 1005.0 90 > th dose independent rect. 2 1
495 99.64 radiation 30.0 30 < th dose independent rect. 7 23
498 99.65 radiation 20.0 30 < th dose independent rect. 6 6
524 99.66 wind 3.0 10 < th dose dependent rect. 14 18
526 99.67 temperature 25.0 10 > th dose independent rect. 20 9
535 99.67 atmosphere 995.0 30 > th dose dependent rect. 7 23
549 99.69 temperature 30.0 90 < th dose independent rect. 7 23
551 99.70 wind 9.0 1440 < th dose independent rect. 3 1
552 99.70 temperature 10.0 1440 > th dose independent rect. 3 1
555 99.70 temperature 30.0 1440 < th dose independent rect. 3 1
559 99.70 humidity 50.0 1440 > th dose independent rect. 3 1
568 99.70 atmosphere 995.0 1440 > th dose independent rect. 3 1
569 99.70 radiation 1.0 1440 < th dose independent rect. 3 1
601 99.70 atmosphere 1000.0 10 > th dose independent rect. 19 11
602 99.70 temperature 30.0 10 < th dose independent rect. 6 13
607 99.70 temperature 10.0 1440 > th dose independent rect. 4 23
611 99.70 humidity 90.0 10 < th dose dependent rect. 6 1
612 99.70 radiation 1.0 1440 < th dose dependent rect. 3 1
631 99.71 atmosphere 1005.0 30 > th dose dependent rect. 2 1
638 99.72 temperature 20.0 30 > th dose independent rect. 2 1
640 99.72 temperature 20.0 10 > th dose independent rect. 2 6
653 99.73 humidity 80.0 30 > th dose independent rect. 2 1
668 99.74 temperature 10.0 30 > th dose independent rect. 2 1
671 99.74 temperature 30.0 30 < th dose independent rect. 2 1
672 99.74 humidity 50.0 30 > th dose independent rect. 2 1
676 99.74 atmosphere 995.0 30 > th dose independent rect. 2 1
678 99.74 atmosphere 1010.0 30 < th dose independent rect. 2 1
680 99.74 radiation 1.0 30 < th dose independent rect. 2 1
685 99.74 precipitation 0.1 30 < th dose independent rect. 2 1
688 99.74 atmosphere 995.0 10 > th dose independent rect. 6 13
693 99.74 temperature 10.0 30 > th dose independent rect. 3 23
694 99.74 humidity 50.0 30 > th dose dependent rect. 2 1
699 99.74 radiation 1.0 30 < th dose dependent rect. 2 1
704 99.74 precipitation 0.1 30 < th dose dependent rect. 2 1
713 99.75 wind 9.0 10 < th dose independent rect. 19 11
722 99.76 atmosphere 1000.0 720 > th dose independent rect. 7 8
723 99.76 temperature 10.0 10 > th dose independent rect. 19 11
724 99.76 temperature 30.0 10 < th dose independent rect. 19 11
725 99.76 humidity 50.0 10 > th dose independent rect. 19 11
728 99.76 radiation 20.0 10 < th dose independent rect. 19 11
731 99.76 temperature 10.0 10 > th dose independent rect. 6 13
733 99.76 atmosphere 1015.0 10 < th dose independent rect. 6 13
734 99.76 precipitation 0.1 10 < th dose independent rect. 6 13
735 99.76 humidity 90.0 270 < th dose independent rect. 7 14
738 99.76 wind 1.0 10 > th dose independent rect. 15 23
744 99.76 precipitation 0.1 10 < th dose dependent rect. 6 13
747 99.77 atmosphere 995.0 4320 > th dose independent rect. 23 1
748 99.77 radiation 1.0 720 < th dose independent rect. 18 1
756 99.77 atmosphere 1015.0 30 < th dose dependent rect. 2 1
772 99.78 atmosphere 995.0 30 > th dose independent rect. 3 23
780 99.79 wind 1.0 10 > th dose independent sin 11 NA
791 99.79 radiation 10.0 270 < th dose independent rect. 22 12
794 99.79 atmosphere 1000.0 720 > th dose independent rect. 3 23
795 99.79 atmosphere 995.0 4320 < th dose dependent sin 8 NA
802 99.80 wind 9.0 4320 > th dose independent rect. 23 1
803 99.80 atmosphere 995.0 4320 < th dose independent rect. 1 1
808 99.80 atmosphere 1000.0 720 < th dose independent rect. 18 1
809 99.80 atmosphere 995.0 4320 < th dose independent rect. 21 1
810 99.80 atmosphere 1005.0 90 < th dose independent rect. 22 1
976 99.80 wind 9.0 4320 > th dose dependent rect. 23 1
979 99.80 atmosphere 995.0 4320 < th dose dependent rect. 1 1
984 99.80 atmosphere 995.0 4320 < th dose dependent rect. 21 1