Os04g0352200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0352200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 464.79 | 1.01 | 3.11 | -0.062 | 0.271 | 1.46 | -0.225 | -1.88 | 0.00401 | 14.3 | 5.174 | 3866 | 2.75 | -- |
| 466.62 | 1.01 | 3.12 | -0.109 | 0.277 | 1.69 | -0.214 | -- | -0.00982 | 14.5 | 5.2 | 3866 | 2.8 | -- |
| 464.98 | 1 | 3.11 | -0.0662 | 0.272 | 1.46 | -- | -1.79 | 0.00339 | 14.3 | 5.17 | 3866 | 2.73 | -- |
| 466.68 | 1.01 | 3.13 | -0.113 | 0.266 | 1.7 | -- | -- | -0.0117 | 14.5 | 5.1 | 3866 | 2.68 | -- |
| 469.16 | 1.01 | 3.11 | -0.0729 | -- | 1.49 | -- | -1.76 | -0.000358 | -- | 5.1 | 3862 | 2.43 | -- |
| 507.24 | 1.06 | 3.18 | -0.406 | 0.257 | -- | -0.0811 | -- | -0.207 | 14.4 | -- | -- | -- | -- |
| 507.26 | 1.05 | 3.18 | -0.409 | 0.257 | -- | -- | -- | -0.208 | 14.5 | -- | -- | -- | -- |
| 470.45 | 1.01 | 3.13 | -0.118 | -- | 1.74 | -- | -- | -0.00793 | -- | 5.397 | 3400 | 2.54 | -- |
| 467.04 | 1.01 | 3.13 | -- | 0.266 | 1.72 | -- | -- | 0.000597 | 14.5 | 5.187 | 3862 | 2.62 | -- |
| 511.15 | 1.06 | 3.18 | -0.419 | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
| 511.66 | 1.06 | 3.17 | -- | 0.265 | -- | -- | -- | -0.162 | 14.5 | -- | -- | -- | -- |
| 470.87 | 1.01 | 3.13 | -- | -- | 1.75 | -- | -- | -0.01 | -- | 5.305 | 3386 | 2.34 | -- |
| 515.8 | 1.06 | 3.17 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 457.14 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 4 | 459.68 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 8 | 459.95 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 11 |
| 9 | 459.97 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 22 | 7 |
| 11 | 460.13 | wind | 5.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 16 | 460.33 | wind | 5.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 42 | 461.18 | wind | 5.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 44 | 461.28 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 45 | 461.29 | wind | 5.0 | 4320 | > th | dose independent | rect. | 22 | 5 |
| 62 | 461.87 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 65 | 461.99 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 82 | 462.43 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 96 | 463.02 | wind | 5.0 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 111 | 463.25 | wind | 5.0 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 121 | 463.44 | wind | 5.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 123 | 463.51 | wind | 5.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 129 | 463.58 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 2 | 3 |
| 135 | 463.70 | wind | 5.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 139 | 463.77 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 149 | 463.94 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 163 | 464.10 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 185 | 464.49 | wind | 5.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 192 | 464.56 | wind | 5.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 218 | 464.80 | wind | 7.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 229 | 464.90 | wind | 7.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 567 | 468.04 | wind | 5.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 596 | 468.20 | wind | 5.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 612 | 468.28 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 653 | 468.78 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 654 | 468.78 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 773 | 469.91 | wind | 5.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 875 | 470.83 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 882 | 470.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 973 | 472.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 974 | 472.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 1 |