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Os04g0348100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.53 (0.0232) R2 : 0.674
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.85 (0.0608) R2dE : 0.655 R2E : 0.657
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.206 (0.0488) R2dN8 : 0.017 R2N8 : 0.0192
σ : 0.436
deviance : 87.49
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 2.753
memory length : 321
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 0.596
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.14 0.421 9.52 0.257 0.601 -1.58 -0.778 -1.18 -0.172 14.7 1.37 309 21.8 --
81.83 0.421 9.53 0.305 0.603 -1.69 -0.416 -- -0.177 14.2 2.707 314 22.3 --
81.6 0.421 9.53 0.265 0.604 -1.64 -- -0.59 -0.179 14.6 2.58 304 22.1 --
82.21 0.422 9.53 0.281 0.582 -1.66 -- -- -0.176 14.5 2.762 304 22.3 --
84.94 0.429 9.54 0.317 -- -1.83 -- -0.21 -0.19 -- 2.878 318 0.579 --
111.55 0.495 9.55 0.338 1.67 -- 0.25 -- -0.185 16.5 -- -- -- --
111.71 0.495 9.55 0.34 1.67 -- -- -- -0.184 16.5 -- -- -- --
85.05 0.43 9.53 0.3 -- -1.84 -- -- -0.18 -- 2.861 318 0.636 --
84.29 0.428 9.52 -- 0.531 -1.7 -- -- -0.188 14.3 2.57 312 22.4 --
261.04 0.755 9.54 0.275 -- -- -- -- -0.228 -- -- -- -- --
114.76 0.501 9.56 -- 1.66 -- -- -- -0.222 16.5 -- -- -- --
87.49 0.436 9.53 -- -- -1.85 -- -- -0.206 -- 2.753 321 0.596 --
263.04 0.757 9.55 -- -- -- -- -- -0.259 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.51 wind 9.0 270 < th dose independent rect. 5 22
2 72.59 wind 5.0 270 < th dose independent rect. 2 4
3 72.62 wind 7.0 270 < th dose independent rect. 6 20
4 72.65 wind 5.0 270 < th dose independent rect. 3 2
5 72.81 wind 7.0 270 < th dose independent rect. 7 18
6 73.12 wind 5.0 270 < th dose independent rect. 1 6
7 73.47 precipitation 0.1 270 < th dose independent rect. 3 2
9 73.47 precipitation 0.1 270 < th dose dependent rect. 3 2
14 74.00 precipitation 0.1 270 < th dose independent rect. 2 4
15 74.00 precipitation 0.1 270 < th dose dependent rect. 2 4
18 74.12 wind 9.0 270 < th dose dependent rect. 3 2
20 74.24 wind 7.0 270 < th dose independent rect. 6 8
21 74.28 wind 9.0 90 < th dose dependent rect. 3 5
23 74.39 precipitation 0.1 270 < th dose independent rect. 1 6
24 74.39 precipitation 0.1 270 < th dose dependent rect. 1 6
34 74.79 temperature 10.0 270 > th dose independent rect. 3 2
36 74.79 temperature 30.0 270 < th dose independent rect. 3 2
37 74.79 humidity 50.0 270 > th dose independent rect. 3 2
40 74.79 atmosphere 995.0 270 > th dose independent rect. 3 2
41 74.79 atmosphere 1010.0 270 < th dose independent rect. 3 2
43 74.79 radiation 20.0 270 < th dose independent rect. 3 2
46 74.79 temperature 10.0 270 > th dose independent rect. 5 22
47 74.84 radiation 40.0 270 < th dose dependent rect. 3 2
51 74.96 radiation 1.0 270 < th dose independent rect. 3 2
53 74.96 radiation 1.0 270 < th dose dependent rect. 3 2
59 75.07 temperature 10.0 270 > th dose independent rect. 2 4
61 75.07 temperature 30.0 270 < th dose independent rect. 2 4
62 75.07 humidity 50.0 270 > th dose independent rect. 2 4
65 75.07 atmosphere 995.0 270 > th dose independent rect. 2 4
66 75.07 atmosphere 1015.0 270 < th dose independent rect. 2 4
67 75.07 radiation 20.0 270 < th dose independent rect. 2 4
70 75.07 temperature 10.0 270 > th dose independent rect. 6 20
71 75.11 radiation 40.0 270 < th dose dependent rect. 1 6
77 75.27 radiation 40.0 270 < th dose dependent rect. 2 4
87 75.33 temperature 10.0 90 > th dose independent rect. 8 19
88 75.34 temperature 10.0 270 > th dose independent rect. 1 6
90 75.34 temperature 30.0 270 < th dose independent rect. 1 6
91 75.34 humidity 50.0 270 > th dose independent rect. 1 6
93 75.34 atmosphere 995.0 270 > th dose independent rect. 1 6
94 75.34 atmosphere 1015.0 270 < th dose independent rect. 1 6
95 75.34 radiation 40.0 270 < th dose independent rect. 1 6
101 75.40 wind 9.0 270 < th dose dependent rect. 1 6
113 75.83 precipitation 0.1 90 < th dose independent rect. 8 19
114 75.83 precipitation 0.1 90 < th dose dependent rect. 8 19
119 75.92 humidity 50.0 270 > th dose dependent rect. 3 2
121 75.96 humidity 50.0 270 > th dose independent rect. 6 7
123 75.99 precipitation 0.1 270 < th dose independent rect. 6 20
124 75.99 precipitation 0.1 270 < th dose dependent rect. 6 20
136 76.13 precipitation 0.1 270 < th dose independent rect. 6 8
138 76.13 precipitation 0.1 270 < th dose dependent rect. 6 8
143 76.22 temperature 10.0 270 > th dose independent rect. 6 7
144 76.22 atmosphere 995.0 270 > th dose independent rect. 6 7
145 76.22 atmosphere 1015.0 270 < th dose independent rect. 6 7
146 76.22 temperature 10.0 270 > th dose independent rect. 13 17
147 76.24 precipitation 0.1 270 < th dose independent rect. 14 16
148 76.24 precipitation 0.1 270 < th dose dependent rect. 14 16
157 76.50 wind 9.0 10 < th dose independent rect. 8 20
164 76.57 wind 7.0 270 < th dose independent rect. 17 9
167 76.63 precipitation 0.1 270 < th dose independent rect. 2 15
168 76.63 precipitation 0.1 270 < th dose dependent rect. 2 15
181 76.69 atmosphere 995.0 270 > th dose independent rect. 13 17
183 76.69 humidity 50.0 270 > th dose dependent rect. 2 4
185 76.76 radiation 1.0 270 > th dose independent rect. 6 7
197 76.96 wind 9.0 270 < th dose dependent rect. 6 7
223 77.16 wind 9.0 10 < th dose dependent rect. 4 4
224 77.19 wind 9.0 90 < th dose independent rect. 8 7
229 77.27 radiation 40.0 270 < th dose independent rect. 13 17
232 77.30 wind 5.0 10 < th dose independent rect. 4 4
238 77.36 radiation 10.0 270 < th dose independent rect. 18 8
241 77.38 radiation 40.0 270 < th dose dependent rect. 17 9
245 77.41 temperature 10.0 270 > th dose independent rect. 18 8
246 77.41 humidity 50.0 270 > th dose independent rect. 18 8
250 77.41 temperature 10.0 270 > th dose independent rect. 2 16
251 77.41 atmosphere 1015.0 270 < th dose independent rect. 2 16
261 77.47 wind 9.0 270 < th dose dependent rect. 7 18
273 77.51 precipitation 0.1 270 < th dose independent rect. 5 22
277 77.51 precipitation 0.1 270 < th dose dependent rect. 5 22
279 77.53 humidity 50.0 270 > th dose dependent rect. 1 6
281 77.54 precipitation 0.1 10 < th dose independent rect. 4 4
283 77.54 precipitation 0.1 10 < th dose dependent rect. 4 4
288 77.57 wind 9.0 270 < th dose independent rect. 13 17
293 77.64 precipitation 0.1 90 < th dose independent rect. 8 7
295 77.64 precipitation 0.1 90 < th dose dependent rect. 8 7
302 77.75 temperature 10.0 10 > th dose independent rect. 4 4
304 77.75 temperature 30.0 10 < th dose independent rect. 4 4
305 77.75 humidity 50.0 10 > th dose independent rect. 4 4
307 77.75 atmosphere 995.0 10 > th dose independent rect. 4 4
308 77.75 atmosphere 1015.0 10 < th dose independent rect. 4 4
309 77.75 temperature 10.0 10 > th dose independent rect. 8 20
312 77.85 temperature 10.0 90 > th dose independent rect. 8 7
313 77.85 atmosphere 1015.0 90 < th dose independent rect. 8 7
315 77.86 atmosphere 995.0 270 > th dose independent rect. 18 8
318 77.88 atmosphere 995.0 270 > th dose independent rect. 2 16
325 77.97 temperature 10.0 270 > th dose dependent rect. 2 4
329 78.00 precipitation 0.1 270 < th dose independent rect. 17 9
330 78.00 precipitation 0.1 270 < th dose dependent rect. 17 9
358 78.20 temperature 10.0 270 > th dose dependent rect. 3 2
361 78.25 radiation 40.0 10 < th dose independent rect. 4 4
363 78.28 atmosphere 995.0 90 > th dose independent rect. 8 7
365 78.29 humidity 50.0 270 > th dose independent rect. 6 20
438 78.63 radiation 1.0 90 > th dose independent rect. 8 7
445 78.71 atmosphere 1015.0 270 < th dose independent rect. 13 17
447 78.73 humidity 50.0 90 > th dose independent rect. 8 19
452 78.77 atmosphere 995.0 90 > th dose independent rect. 8 19
457 78.80 precipitation 0.1 10 < th dose independent rect. 8 20
459 78.80 precipitation 0.1 10 < th dose dependent rect. 8 20
464 78.83 temperature 10.0 270 > th dose dependent rect. 6 7
493 79.02 wind 9.0 10 < th dose independent rect. 8 7
496 79.03 temperature 15.0 10 > th dose independent rect. 15 17
501 79.06 wind 1.0 90 > th dose independent rect. 8 7
513 79.14 humidity 50.0 90 > th dose independent rect. 8 7
515 79.16 atmosphere 1015.0 90 < th dose independent rect. 15 17
519 79.18 temperature 30.0 270 < th dose independent rect. 18 8
557 79.41 temperature 10.0 10 > th dose independent rect. 8 7
559 79.41 atmosphere 995.0 10 > th dose independent rect. 8 7
560 79.41 atmosphere 1015.0 10 < th dose independent rect. 8 7
561 79.41 precipitation 0.1 10 < th dose independent rect. 8 7
564 79.41 precipitation 0.1 10 < th dose dependent rect. 8 7
567 79.43 wind 1.0 270 > th dose independent rect. 2 4
574 79.47 wind 9.0 270 < th dose independent rect. 2 16
585 79.56 temperature 10.0 10 > th dose dependent rect. 4 4
586 79.57 radiation 1.0 10 > th dose independent rect. 8 7
600 79.65 wind 1.0 270 > th dose independent rect. 1 6
602 79.65 atmosphere 995.0 10 > th dose independent rect. 15 17
617 79.77 precipitation 0.1 10 < th dose independent rect. 15 17
618 79.77 precipitation 0.1 10 < th dose dependent rect. 15 17
663 79.91 temperature 10.0 90 > th dose dependent rect. 8 7
680 79.94 atmosphere 995.0 90 > th dose dependent rect. 3 5
698 80.02 temperature 10.0 270 > th dose dependent rect. 1 6
714 80.06 radiation 40.0 10 < th dose independent rect. 15 17
746 80.17 temperature 10.0 1440 > th dose independent rect. 9 7
749 80.17 temperature 10.0 1440 > th dose independent rect. 16 17
766 80.22 atmosphere 1015.0 10 < th dose independent rect. 15 17
780 80.29 temperature 30.0 270 < th dose dependent rect. 3 2
800 80.36 temperature 10.0 10 > th dose dependent rect. 8 7
804 80.39 wind 1.0 10 > th dose independent rect. 8 7
817 80.44 atmosphere 995.0 10 > th dose independent rect. 8 20
831 80.52 wind 9.0 10 < th dose independent rect. 15 17
843 80.55 wind 1.0 270 > th dose independent rect. 3 1
896 80.72 wind 1.0 270 > th dose independent rect. 6 7
900 80.75 atmosphere 995.0 270 > th dose dependent rect. 3 2
916 80.80 atmosphere 995.0 270 > th dose independent rect. 6 20
947 80.85 temperature 10.0 270 > th dose dependent rect. 7 4