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Os04g0339000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.4 (0.082) R2 : 0.644
β1 : 7.45 (0.301) R2dD : 0.522 R2D : 0.333
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.34 (0.504) R2dE : 0.085 R2E : -0.255
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 25.8 (2.28) R2dD*E : 0.24 R2D*E : 0.0386
γ1 : 2.46 (0.176) R2dN8 : 0.216 R2N8 : 0.064
σ : 1.5
deviance : 1035.73
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C
peak time of C : --
E
wheather : wind
threshold : 7
memory length : 4593
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 19
open length of G : 0.982

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1033.48 1.51 7.4 7.43 0.0414 3.35 0.902 25.8 2.46 7.12 7 4593 19 0.981
1138.77 1.57 7.06 7.71 0.116 2.35 -1.46 -- 2.82 18.8 6 47073 19 1.59
1035.61 1.5 7.4 7.45 0.043 3.33 -- 25.7 2.46 8.46 7 4593 19 0.982
1104.06 1.55 7.07 7.82 0.122 2.61 -- -- 3.32 18.1 6.3 47075 19.1 1.62
1035.73 1.5 7.4 7.45 -- 3.34 -- 25.8 2.46 -- 7 4593 19 0.982
1340.41 1.72 7.2 7.1 0.104 -- -1.07 -- 2.53 16.7 -- -- -- --
1343 1.72 7.21 7.1 0.124 -- -- -- 2.53 13.8 -- -- -- --
1090.39 1.54 6.96 8.26 -- 3.21 -- -- 3.65 -- 6.127 47175 19.1 1.46
1431.17 1.76 7.12 -- 0.163 4.15 -- -- 2.9 3.56 10.69 47520 19 1.89
1343.93 1.71 7.21 7.09 -- -- -- -- 2.52 -- -- -- -- --
2669.91 2.42 7.38 -- 0.0517 -- -- -- 1.74 7.35 -- -- -- --
1432.64 1.76 7.12 -- -- 4.15 -- -- 2.9 -- 10.69 47520 19 1.89
2670.05 2.41 7.38 -- -- -- -- -- 1.74 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1008.48 wind 9.0 43200 > th dose dependent rect. 18 13
6 1022.24 wind 9.0 43200 > th dose dependent rect. 18 6
8 1023.05 wind 9.0 43200 > th dose independent rect. 18 13
9 1023.56 atmosphere 1005.0 14400 < th dose independent rect. 22 1
11 1025.36 atmosphere 1005.0 14400 > th dose independent rect. 22 1
13 1026.98 wind 9.0 43200 > th dose independent rect. 18 11
15 1028.42 precipitation 0.1 14400 > th dose dependent rect. 20 2
17 1028.77 wind 9.0 14400 > th dose dependent rect. 18 3
21 1030.63 wind 9.0 14400 < th dose independent rect. 18 3
23 1031.93 wind 9.0 43200 > th dose independent rect. 17 16
24 1032.25 wind 9.0 43200 > th dose independent rect. 18 6
32 1037.18 wind 9.0 43200 < th dose independent rect. 18 13
35 1037.74 wind 9.0 43200 < th dose independent rect. 17 16
36 1037.94 wind 9.0 43200 > th dose dependent rect. 20 1
41 1039.35 wind 9.0 14400 > th dose independent rect. 18 3
44 1040.48 wind 9.0 43200 < th dose independent rect. 18 10
45 1040.71 atmosphere 995.0 43200 < th dose dependent rect. 15 1
47 1040.82 wind 7.0 43200 > th dose dependent rect. 16 17
49 1041.34 atmosphere 1005.0 14400 < th dose independent rect. 20 15
50 1041.47 atmosphere 1005.0 14400 > th dose independent rect. 20 5
57 1042.16 wind 9.0 43200 < th dose independent rect. 18 6
58 1042.22 atmosphere 1005.0 14400 < th dose independent rect. 20 10
78 1043.91 atmosphere 995.0 43200 < th dose independent rect. 15 1
84 1044.71 atmosphere 1005.0 14400 > th dose independent rect. 20 11
86 1044.84 atmosphere 1005.0 14400 > th dose independent rect. 20 14
104 1045.78 atmosphere 995.0 43200 > th dose independent rect. 15 1
136 1048.02 wind 7.0 4320 > th dose dependent rect. 19 1
157 1049.14 wind 9.0 43200 > th dose dependent sin 13 NA
164 1050.04 atmosphere 1005.0 14400 < th dose independent sin 9 NA
203 1052.51 atmosphere 1005.0 14400 > th dose independent sin 9 NA
229 1054.00 atmosphere 1005.0 14400 < th dose dependent rect. 24 1
236 1054.48 atmosphere 1005.0 14400 < th dose independent rect. 9 1
252 1055.49 wind 9.0 43200 > th dose independent sin 12 NA
263 1055.96 atmosphere 1005.0 14400 < th dose independent rect. 3 8
290 1057.23 atmosphere 1005.0 14400 < th dose independent rect. 7 4
303 1057.91 atmosphere 1005.0 14400 > th dose independent rect. 4 2
335 1059.16 atmosphere 1005.0 14400 > th dose independent rect. 24 1
346 1059.60 atmosphere 1005.0 14400 > th dose independent rect. 3 7
376 1060.28 precipitation 0.1 14400 > th dose dependent rect. 20 5
398 1060.95 atmosphere 1005.0 14400 > th dose independent rect. 8 1
434 1062.08 atmosphere 1005.0 14400 < th dose independent rect. 4 1
448 1062.56 atmosphere 995.0 43200 > th dose independent rect. 14 7
466 1062.98 atmosphere 1005.0 14400 < th dose independent rect. 3 3
488 1063.65 radiation 20.0 4320 > th dose dependent rect. 16 1
578 1065.46 wind 7.0 4320 < th dose independent rect. 18 9
617 1066.09 atmosphere 1005.0 14400 < th dose dependent sin 14 NA
663 1066.86 wind 7.0 4320 > th dose independent rect. 18 9
668 1066.92 precipitation 0.1 14400 > th dose independent rect. 20 2
671 1066.94 precipitation 0.1 14400 < th dose independent rect. 20 2
672 1066.94 precipitation 0.1 14400 < th dose dependent rect. 20 2
736 1068.07 wind 9.0 43200 < th dose independent sin 12 NA
807 1069.12 atmosphere 1005.0 14400 < th dose independent rect. 2 23
808 1069.13 atmosphere 1005.0 14400 < th dose independent no NA NA
887 1070.11 atmosphere 1005.0 14400 < th dose independent rect. 7 23
896 1070.33 atmosphere 1005.0 14400 < th dose independent rect. 9 23
900 1070.38 atmosphere 1005.0 14400 < th dose dependent rect. 15 1