Os04g0332700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0332700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312.68 | 0.824 | 3.18 | 0.104 | 0.163 | 16.5 | 0.0484 | 50.5 | -0.402 | 1.21 | 9 | 90 | 13 | 3 |
| 336.9 | 0.855 | 3.11 | 0.163 | 0.0509 | 9.03 | -1 | -- | -0.221 | 8.54 | 7.616 | 131 | 13.7 | 1.65 |
| 312.68 | 0.824 | 3.18 | 0.108 | 0.164 | 16.5 | -- | 50.7 | -0.401 | 1.27 | 9.043 | 89 | 13 | 3.05 |
| 319.87 | 0.833 | 3.18 | -0.0112 | 0.0363 | 7.76 | -- | -- | -0.399 | 19.9 | 8.034 | 115 | 13.8 | 1.79 |
| 314.32 | 0.826 | 3.18 | 0.112 | -- | 16.8 | -- | 52.1 | -0.4 | -- | 9.209 | 89 | 13 | 2.97 |
| 345.94 | 0.872 | 3.14 | -0.134 | 0.125 | -- | 0.156 | -- | -0.427 | 0.167 | -- | -- | -- | -- |
| 346.04 | 0.871 | 3.14 | -0.14 | 0.125 | -- | -- | -- | -0.428 | 23.9 | -- | -- | -- | -- |
| 313.75 | 0.825 | 3.14 | -0.074 | -- | 5.7 | -- | -- | -0.404 | -- | 9.1 | 85 | 13.5 | 2.1 |
| 312.15 | 0.823 | 3.12 | -- | 0.166 | 6.06 | -- | -- | -0.413 | 4.27 | 8.435 | 115 | 13.9 | 1.35 |
| 347.02 | 0.87 | 3.14 | -0.136 | -- | -- | -- | -- | -0.426 | -- | -- | -- | -- | -- |
| 346.56 | 0.871 | 3.14 | -- | 0.123 | -- | -- | -- | -0.412 | 23.9 | -- | -- | -- | -- |
| 312.91 | 0.824 | 3.13 | -- | -- | 5.84 | -- | -- | -0.388 | -- | 8.399 | 107 | 13.8 | 1.52 |
| 347.51 | 0.87 | 3.14 | -- | -- | -- | -- | -- | -0.411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.68 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 3 |
| 2 | 312.79 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 3 |
| 9 | 315.67 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 17 | 315.67 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 31 | 318.04 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 33 | 319.34 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 39 | 320.00 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 54 | 321.39 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 58 | 322.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 62 | 322.25 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 69 | 322.28 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 94 | 322.66 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 118 | 323.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 127 | 324.04 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 165 | 326.15 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 169 | 326.15 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 175 | 326.26 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 184 | 326.51 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 186 | 326.66 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 190 | 326.82 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 191 | 326.83 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 193 | 326.86 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 194 | 326.86 | wind | 9.0 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 204 | 326.93 | wind | 7.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 206 | 326.95 | wind | 7.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 216 | 327.02 | wind | 7.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 224 | 327.15 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 225 | 327.17 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 233 | 327.36 | wind | 9.0 | 270 | > th | dose independent | rect. | 20 | 20 |
| 241 | 327.54 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 254 | 327.78 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 273 | 327.98 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 275 | 328.00 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 277 | 328.02 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 282 | 328.10 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 310 | 328.23 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 321 | 328.23 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 337 | 328.29 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 338 | 328.29 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 360 | 328.38 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 413 | 328.63 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 414 | 328.64 | humidity | 60.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 415 | 328.64 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 432 | 328.66 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 433 | 328.66 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 449 | 328.69 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 458 | 328.76 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 466 | 328.80 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 14 | 19 |
| 467 | 328.81 | radiation | 10.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 477 | 328.87 | humidity | 60.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 479 | 328.87 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 518 | 328.99 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 542 | 329.06 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 551 | 329.08 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 554 | 329.09 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 558 | 329.11 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 587 | 329.14 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 589 | 329.14 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 2 |
| 602 | 329.16 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 610 | 329.17 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 615 | 329.18 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 622 | 329.20 | radiation | 40.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 667 | 329.26 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 669 | 329.26 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 671 | 329.26 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 723 | 329.26 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 724 | 329.26 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 726 | 329.26 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 728 | 329.26 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 802 | 329.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 810 | 329.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 850 | 329.37 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 863 | 329.38 | temperature | 20.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 868 | 329.39 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 871 | 329.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 872 | 329.40 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 996 | 329.61 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 997 | 329.61 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 11 |