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Os04g0330900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.36 (0.0227) R2 : 0.632
β1 : -0.806 (0.0831) R2dD : 0.0787 R2D : -0.167
β2 : 0.691 (0.0552) R2dC : 0.127 R2C : -0.0207
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.19 (0.0484) R2dN8 : 0.65 R2N8 : 0.428
σ : 0.427
deviance : 82.99
__
_____
C
peak time of C : 21.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
77.78 0.414 9.33 -0.907 0.69 2.9 -0.726 9.73 -1.19 21.6 8.96 30 -- --
80.69 0.422 9.36 -0.793 0.695 -0.532 -0.63 -- -1.18 21.7 8.96 30 -- --
79.69 0.416 9.33 -0.876 0.682 2.68 -- 8.93 -1.19 21.7 8.999 29 -- --
82.15 0.425 9.36 -0.775 0.695 -0.467 -- -- -1.18 21.8 8.96 30 -- --
107.82 0.484 9.31 -0.868 -- 2.58 -- 7.83 -1.19 -- 9.1 22 -- --
81.76 0.424 9.36 -0.826 0.69 -- -0.577 -- -1.19 21.7 -- -- -- --
82.99 0.427 9.36 -0.806 0.691 -- -- -- -1.19 21.8 -- -- -- --
110.65 0.49 9.34 -0.843 -- 0.38 -- -- -1.2 -- 8.307 53 -- --
97.5 0.462 9.34 -- 0.697 -0.81 -- -- -1.09 21.8 8.96 30 -- --
111.46 0.493 9.34 -0.799 -- -- -- -- -1.19 -- -- -- -- --
100.09 0.468 9.34 -- 0.689 -- -- -- -1.1 21.7 -- -- -- --
108.5 0.485 9.29 -- -- -0.843 -- -- -1.09 -- 6.804 30932 -- --
128.29 0.529 9.32 -- -- -- -- -- -1.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.33 temperature 25.0 270 > th dose dependent rect. 10 1
3 71.56 temperature 25.0 10 > th dose independent rect. 20 11
7 72.10 temperature 25.0 10 > th dose independent rect. 20 13
8 72.10 temperature 25.0 720 > th dose dependent rect. 19 12
10 72.22 temperature 25.0 720 > th dose dependent rect. 19 7
22 72.51 temperature 25.0 270 > th dose independent rect. 10 1
27 72.61 temperature 25.0 720 > th dose independent rect. 20 9
28 72.63 temperature 25.0 720 > th dose dependent rect. 21 1
32 72.66 temperature 15.0 1440 > th dose independent rect. 11 1
35 72.70 temperature 30.0 10 < th dose independent rect. 11 23
40 72.75 temperature 25.0 720 > th dose independent rect. 20 6
41 72.76 temperature 20.0 10 > th dose dependent rect. 20 13
55 72.99 temperature 25.0 270 > th dose dependent rect. 7 6
72 73.17 radiation 1.0 1440 > th dose independent rect. 11 1
77 73.23 temperature 20.0 10 > th dose dependent rect. 20 11
80 73.26 temperature 25.0 90 > th dose independent rect. 16 15
98 73.38 temperature 25.0 10 > th dose dependent rect. 10 5
103 73.43 temperature 25.0 270 > th dose independent rect. 8 5
104 73.45 humidity 70.0 30 > th dose independent rect. 12 1
106 73.47 temperature 25.0 90 > th dose independent sin 11 NA
107 73.47 temperature 25.0 90 > th dose independent rect. 15 18
110 73.49 temperature 25.0 10 > th dose independent sin 10 NA
125 73.66 radiation 30.0 10 < th dose dependent rect. 10 1
129 73.68 humidity 60.0 30 > th dose independent rect. 12 16
133 73.71 temperature 25.0 90 < th dose independent rect. 19 9
138 73.73 humidity 60.0 30 > th dose dependent rect. 10 1
165 73.91 radiation 30.0 10 < th dose independent rect. 10 1
167 73.91 temperature 20.0 10 > th dose dependent sin 11 NA
169 73.93 temperature 25.0 10 > th dose independent rect. 16 15
171 73.94 wind 3.0 30 > th dose independent rect. 10 1
174 73.96 temperature 25.0 30 > th dose independent rect. 12 1
175 73.96 precipitation 0.1 30 < th dose independent rect. 11 23
176 73.96 temperature 20.0 270 > th dose dependent rect. 16 15
177 73.96 precipitation 0.1 30 < th dose dependent rect. 11 23
179 73.97 temperature 25.0 10 > th dose independent rect. 16 17
181 73.99 temperature 15.0 1440 > th dose independent rect. 13 1
187 74.04 temperature 25.0 30 > th dose dependent rect. 12 1
201 74.11 atmosphere 995.0 1440 > th dose independent rect. 13 1
207 74.11 temperature 10.0 1440 > th dose independent rect. 14 23
210 74.11 humidity 60.0 10 > th dose dependent rect. 12 1
213 74.12 temperature 15.0 30 > th dose independent rect. 11 23
218 74.13 temperature 25.0 10 > th dose dependent rect. 10 3
232 74.18 humidity 60.0 30 > th dose independent rect. 10 1
233 74.18 temperature 25.0 90 < th dose independent rect. 21 7
235 74.19 atmosphere 1005.0 30 > th dose dependent rect. 10 1
237 74.20 wind 5.0 30 < th dose independent rect. 10 1
242 74.20 humidity 60.0 90 > th dose independent rect. 9 19
243 74.20 precipitation 0.1 30 < th dose independent rect. 13 23
246 74.20 precipitation 0.1 30 < th dose dependent rect. 13 23
247 74.21 atmosphere 1000.0 30 > th dose independent rect. 10 1
248 74.21 atmosphere 1010.0 30 < th dose independent rect. 10 1
258 74.24 temperature 20.0 30 > th dose independent rect. 10 1
264 74.25 temperature 10.0 30 > th dose independent rect. 10 1
267 74.25 humidity 90.0 30 < th dose independent rect. 10 1
270 74.25 radiation 1.0 30 > th dose independent rect. 10 1
271 74.25 precipitation 0.1 30 < th dose independent rect. 10 1
274 74.25 precipitation 0.1 30 < th dose dependent rect. 10 1
276 74.26 wind 1.0 30 < th dose independent rect. 10 1
281 74.26 temperature 30.0 30 < th dose independent rect. 10 1
282 74.26 atmosphere 995.0 1440 > th dose independent rect. 11 1
285 74.26 precipitation 0.1 1440 < th dose independent rect. 11 1
288 74.26 temperature 10.0 1440 > th dose independent rect. 12 23
291 74.26 wind 1.0 30 < th dose dependent rect. 10 1
292 74.26 wind 9.0 30 < th dose dependent rect. 10 1
293 74.26 precipitation 0.1 1440 < th dose dependent rect. 11 1
296 74.27 temperature 10.0 30 > th dose dependent rect. 10 1
320 74.31 radiation 40.0 30 > th dose independent rect. 12 1
327 74.33 wind 1.0 30 > th dose dependent rect. 10 1
350 74.38 radiation 40.0 30 > th dose dependent rect. 12 1
351 74.38 temperature 15.0 90 > th dose dependent rect. 15 18
352 74.39 atmosphere 1010.0 30 < th dose independent rect. 12 1
354 74.39 atmosphere 1015.0 30 < th dose dependent rect. 10 1
358 74.39 humidity 50.0 30 > th dose dependent rect. 12 16
360 74.40 temperature 15.0 30 > th dose independent rect. 13 23
367 74.42 humidity 70.0 30 < th dose independent rect. 10 1
370 74.42 humidity 90.0 30 < th dose dependent rect. 10 1
378 74.44 wind 3.0 30 > th dose independent rect. 12 1
379 74.44 radiation 10.0 30 > th dose independent rect. 12 1
384 74.44 atmosphere 1015.0 30 < th dose dependent rect. 12 1
397 74.45 wind 9.0 1440 < th dose independent rect. 5 5
399 74.45 wind 3.0 30 > th dose dependent rect. 12 1
416 74.49 radiation 1.0 30 > th dose dependent rect. 10 1
428 74.52 temperature 25.0 720 > th dose independent sin 12 NA
429 74.52 wind 9.0 30 < th dose independent rect. 12 1
430 74.52 temperature 10.0 30 > th dose independent rect. 12 1
432 74.52 atmosphere 995.0 30 > th dose independent rect. 12 1
435 74.52 precipitation 0.1 30 < th dose independent rect. 12 1
438 74.52 precipitation 0.1 30 < th dose dependent rect. 12 1
442 74.54 wind 5.0 30 < th dose independent rect. 12 1
447 74.54 atmosphere 1005.0 30 > th dose dependent rect. 12 1
452 74.55 wind 9.0 30 < th dose dependent rect. 12 1
456 74.56 atmosphere 1005.0 30 > th dose independent rect. 12 1
457 74.56 atmosphere 995.0 30 > th dose dependent rect. 12 1
465 74.58 humidity 90.0 30 < th dose independent rect. 12 1
468 74.58 humidity 90.0 30 < th dose dependent rect. 12 1
472 74.59 temperature 30.0 30 < th dose independent rect. 12 1
482 74.61 temperature 25.0 270 > th dose dependent sin 5 NA
490 74.63 humidity 70.0 30 < th dose independent rect. 12 1
548 74.76 temperature 25.0 270 < th dose independent rect. 21 5
549 74.76 temperature 25.0 1440 < th dose independent rect. 22 7
564 74.80 temperature 20.0 30 > th dose independent rect. 4 8
568 74.81 wind 9.0 4320 < th dose independent rect. 15 2
582 74.83 wind 7.0 10 < th dose independent rect. 4 8
585 74.84 wind 9.0 4320 > th dose independent rect. 15 1
602 74.88 temperature 25.0 90 > th dose independent rect. 22 9
611 74.90 humidity 90.0 1440 < th dose independent rect. 11 1
614 74.91 temperature 25.0 90 > th dose independent rect. 24 7
636 74.97 temperature 25.0 90 < th dose independent rect. 23 5
647 75.00 temperature 20.0 10 > th dose independent rect. 15 21
663 75.03 wind 7.0 30 < th dose independent rect. 12 16
666 75.04 temperature 25.0 270 < th dose independent rect. 23 2
669 75.04 wind 9.0 4320 > th dose dependent rect. 15 2
676 75.06 wind 9.0 30 < th dose independent rect. 11 23
730 75.16 temperature 25.0 1440 < th dose independent rect. 23 3
739 75.17 atmosphere 995.0 30 > th dose independent rect. 11 23
767 75.21 humidity 50.0 270 > th dose independent rect. 5 23
799 75.26 wind 3.0 720 < th dose dependent rect. 4 1
804 75.27 temperature 25.0 90 < th dose independent sin 12 NA
806 75.27 temperature 15.0 270 > th dose dependent rect. 4 1
818 75.29 wind 9.0 4320 > th dose dependent rect. 13 1
824 75.30 humidity 50.0 90 > th dose dependent rect. 9 19
835 75.32 wind 9.0 30 < th dose independent rect. 13 23
849 75.34 temperature 30.0 30 < th dose dependent rect. 18 10
858 75.35 atmosphere 995.0 30 > th dose independent rect. 13 23
860 75.35 humidity 80.0 4320 < th dose dependent rect. 21 2
939 75.45 radiation 30.0 720 < th dose independent rect. 16 17
948 75.46 humidity 80.0 4320 < th dose dependent rect. 20 8
950 75.47 temperature 30.0 1440 > th dose independent rect. 13 1
961 75.48 atmosphere 1015.0 30 < th dose independent rect. 11 23
967 75.48 temperature 10.0 30 > th dose dependent rect. 11 23
969 75.49 temperature 20.0 30 > th dose independent rect. 4 5