Os04g0324100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0324100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.27 | 0.546 | 12.4 | 1.51 | 1.27 | -0.45 | -0.291 | -6.5 | -1.48 | 5.26 | 15.1 | 5766 | -- | -- |
| 172.73 | 0.617 | 12.2 | 3.09 | 1.15 | -0.47 | -0.608 | -- | -1.01 | 5.68 | 15.1 | 5766 | -- | -- |
| 135.46 | 0.542 | 12.4 | 1.5 | 1.27 | -0.442 | -- | -6.5 | -1.49 | 5.25 | 15.2 | 5720 | -- | -- |
| 164.29 | 0.597 | 12.1 | 3.75 | 1.25 | -0.737 | -- | -- | -0.711 | 5.27 | 25.5 | 47520 | -- | -- |
| 217.48 | 0.687 | 12.4 | 1.59 | -- | -0.35 | -- | -6.24 | -1.44 | -- | 15.1 | 4755 | -- | -- |
| 174.97 | 0.62 | 12.2 | 3 | 1.25 | -- | -0.48 | -- | -1.08 | 5.35 | -- | -- | -- | -- |
| 175.54 | 0.62 | 12.2 | 3 | 1.24 | -- | -- | -- | -1.08 | 5.33 | -- | -- | -- | -- |
| 220.26 | 0.694 | 12.2 | 3.2 | -- | -1.26 | -- | -- | -0.989 | -- | 25.5 | 47520 | -- | -- |
| 250.51 | 0.737 | 12.4 | -- | 1.23 | 2.05 | -- | -- | -2.03 | 5.43 | 7.4 | 47520 | -- | -- |
| 255.97 | 0.748 | 12.2 | 3.04 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 412.28 | 0.95 | 12.2 | -- | 1.29 | -- | -- | -- | -1.41 | 5.24 | -- | -- | -- | -- |
| 329.79 | 0.846 | 12.4 | -- | -- | 2.1 | -- | -- | -2.01 | -- | 7.106 | 47520 | -- | -- |
| 499.68 | 1.04 | 12.3 | -- | -- | -- | -- | -- | -1.39 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.23 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 2 | 123.25 | wind | 7 | 43200 | > th | dose independent | sin | 10 | NA |
| 3 | 123.28 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 4 | 123.32 | wind | 7 | 43200 | < th | dose independent | sin | 10 | NA |
| 8 | 123.50 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 9 | 123.51 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 14 | 123.60 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 17 | 123.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 27 | 124.04 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 235 | 126.81 | wind | 5 | 43200 | > th | dose independent | sin | 5 | NA |
| 245 | 126.88 | wind | 5 | 43200 | > th | dose dependent | sin | 5 | NA |
| 251 | 126.93 | wind | 5 | 43200 | < th | dose independent | sin | 5 | NA |
| 265 | 127.10 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 283 | 127.41 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 295 | 127.41 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 351 | 127.90 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 362 | 128.02 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 364 | 128.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 367 | 128.06 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 372 | 128.10 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 388 | 128.23 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 392 | 128.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 399 | 128.30 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 407 | 128.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 422 | 128.47 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 437 | 128.59 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 460 | 128.77 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 514 | 129.05 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 535 | 129.14 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 557 | 129.24 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 567 | 129.30 | temperature | 20 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 584 | 129.36 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 594 | 129.41 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 608 | 129.48 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 671 | 129.74 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 2 | 16 |
| 708 | 129.89 | temperature | 15 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 728 | 129.99 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 740 | 130.03 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 764 | 130.11 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 773 | 130.15 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 784 | 130.18 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 874 | 130.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 945 | 130.73 | wind | 7 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 957 | 130.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 984 | 130.83 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 3 |