Os04g0320700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucosyltransferase (Fragment).
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Os04g0320700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucosyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278.55 | 0.784 | 12.2 | 0.369 | 1.78 | -4.12 | 1.15 | -0.793 | -0.819 | 7.56 | 0.7783 | 247 | 9.19 | -- |
| 278.94 | 0.778 | 12.2 | 0.403 | 1.79 | -4.13 | 1.44 | -- | -0.81 | 7.55 | 0.78 | 245 | 9.22 | -- |
| 281.17 | 0.781 | 12.2 | 0.335 | 1.76 | -4.11 | -- | -1.72 | -0.829 | 7.58 | 0.75 | 245 | 9.26 | -- |
| 284.25 | 0.785 | 12.2 | 0.455 | 1.73 | -4.2 | -- | -- | -0.81 | 7.64 | 0.7259 | 244 | 9.26 | -- |
| 368.83 | 0.894 | 12.2 | 0.614 | -- | -5.33 | -- | -0.731 | -0.664 | -- | 0.41 | 249 | 9.76 | -- |
| 525.63 | 1.07 | 12.2 | 0.154 | 4.21 | -- | 2.15 | -- | -1.05 | 6.42 | -- | -- | -- | -- |
| 537.11 | 1.09 | 12.2 | 0.182 | 4.22 | -- | -- | -- | -1.05 | 6.41 | -- | -- | -- | -- |
| 323.71 | 0.838 | 12.3 | 0.385 | -- | -5.15 | -- | -- | -0.822 | -- | 1.29 | 440 | 11.5 | -- |
| 289.56 | 0.793 | 12.2 | -- | 1.79 | -4.15 | -- | -- | -0.826 | 7.58 | 0.78 | 243 | 9.15 | -- |
| 1460.35 | 1.79 | 12.3 | 0.29 | -- | -- | -- | -- | -0.965 | -- | -- | -- | -- | -- |
| 537.98 | 1.08 | 12.2 | -- | 4.22 | -- | -- | -- | -1.07 | 6.4 | -- | -- | -- | -- |
| 318.65 | 0.831 | 12.3 | -- | -- | -5.11 | -- | -- | -0.892 | -- | 0.64 | 433 | 11.6 | -- |
| 1462.57 | 1.79 | 12.3 | -- | -- | -- | -- | -- | -0.997 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.85 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 3 | 272.60 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 11 | 279.24 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 13 | 281.46 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 14 | 282.62 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 40 | 287.72 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 41 | 287.84 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 48 | 288.49 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 49 | 288.76 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 50 | 288.77 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 110 | 299.08 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 122 | 300.02 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 12 |
| 123 | 300.03 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 124 | 300.04 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 10 |
| 171 | 305.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 190 | 307.89 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 245 | 313.36 | temperature | 25.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 258 | 313.53 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 299 | 316.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 346 | 319.90 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 349 | 320.07 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 361 | 320.46 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 362 | 320.49 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 365 | 320.61 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 382 | 321.82 | temperature | 25.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 383 | 321.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 386 | 322.09 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 5 |
| 435 | 324.41 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 4 |
| 436 | 324.41 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 480 | 325.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 485 | 325.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 493 | 326.02 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 496 | 326.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 506 | 326.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 13 |
| 539 | 327.09 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 562 | 328.31 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 4 |
| 582 | 329.17 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 594 | 329.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 595 | 329.35 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 628 | 330.42 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 4 |
| 630 | 330.42 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 632 | 330.42 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 635 | 330.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 5 |
| 636 | 330.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 637 | 330.53 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 17 |
| 642 | 330.85 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 647 | 331.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 653 | 331.22 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 661 | 331.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 663 | 331.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 671 | 331.99 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 688 | 332.58 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 696 | 332.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 740 | 334.35 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 760 | 334.63 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 761 | 334.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 779 | 335.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 792 | 335.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 807 | 336.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 809 | 336.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 855 | 337.83 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 10 |
| 897 | 339.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 917 | 339.73 | humidity | 80.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 935 | 340.33 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 939 | 340.46 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 953 | 340.96 | radiation | 1.0 | 270 | > th | dose dependent | sin | 14 | NA |