Os04g0308600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0308600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.91 | 0.838 | 3.4 | -0.301 | 0.158 | 4.5 | -0.441 | 13.9 | -0.458 | 21.1 | 3.353 | 297 | 1.02 | 1.08 |
| 334.78 | 0.852 | 3.39 | -0.316 | 0.174 | 3.9 | -0.591 | -- | -0.464 | 20.5 | 2.099 | 235 | 1.28 | 1.42 |
| 318.19 | 0.831 | 3.39 | -0.329 | 0.12 | 4.14 | -- | 12.5 | -0.461 | 22.3 | 3.134 | 296 | 1.05 | 1.06 |
| 336.08 | 0.854 | 3.39 | -0.263 | 0.164 | 3.79 | -- | -- | -0.443 | 21 | 2.111 | 235 | 1.28 | 1.4 |
| 319.63 | 0.833 | 3.39 | -0.321 | -- | 4.16 | -- | 12.4 | -0.464 | -- | 3.122 | 296 | 1.05 | 1.07 |
| 365.61 | 0.896 | 3.39 | -0.284 | 0.109 | -- | 1.07 | -- | -0.489 | 4.91 | -- | -- | -- | -- |
| 366.42 | 0.896 | 3.4 | -0.291 | 0.214 | -- | -- | -- | -0.495 | 0.893 | -- | -- | -- | -- |
| 337.61 | 0.856 | 3.38 | -0.264 | -- | 3.78 | -- | -- | -0.444 | -- | 2.159 | 235 | 1.29 | 1.4 |
| 337.91 | 0.856 | 3.38 | -- | 0.162 | 3.78 | -- | -- | -0.416 | 21 | 2.11 | 235 | 1.28 | 1.42 |
| 369.27 | 0.898 | 3.39 | -0.283 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 368.65 | 0.898 | 3.39 | -- | 0.209 | -- | -- | -- | -0.463 | 0.832 | -- | -- | -- | -- |
| 339.43 | 0.858 | 3.38 | -- | -- | 3.78 | -- | -- | -0.416 | -- | 2.15 | 235 | 1.28 | 1.37 |
| 371.38 | 0.9 | 3.38 | -- | -- | -- | -- | -- | -0.46 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.94 | wind | 3.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 2 | 323.89 | wind | 3.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 9 | 327.85 | wind | 3.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 33 | 332.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 34 | 333.00 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 58 | 334.26 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 87 | 334.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 10 |
| 98 | 335.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 100 | 335.17 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 101 | 335.17 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 124 | 335.71 | wind | 7.0 | 30 | > th | dose independent | rect. | 13 | 3 |
| 132 | 335.87 | radiation | 30.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 178 | 336.63 | wind | 5.0 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 241 | 337.92 | wind | 5.0 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 268 | 338.46 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 1 |
| 269 | 338.46 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 285 | 338.81 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 3 |
| 286 | 338.81 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 305 | 339.07 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 429 | 340.64 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 12 |
| 585 | 342.18 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 2 |
| 596 | 342.29 | temperature | 25.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 652 | 342.80 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 673 | 342.93 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 6 |
| 678 | 342.95 | temperature | 20.0 | 30 | > th | dose independent | sin | 2 | NA |
| 704 | 343.12 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 744 | 343.39 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 18 |
| 753 | 343.49 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 755 | 343.51 | temperature | 20.0 | 10 | < th | dose independent | sin | 1 | NA |
| 758 | 343.51 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 759 | 343.52 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 781 | 343.54 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 830 | 343.78 | wind | 1.0 | 270 | > th | dose dependent | rect. | 24 | 16 |
| 845 | 343.90 | wind | 3.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 908 | 344.35 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 956 | 344.44 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 3 |