Os04g0308100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wall-associated kinase 4.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0308100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Wall-associated kinase 4.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 336.02 | 0.861 | 5.95 | 2.09 | 1.52 | -3.56 | -1.12 | -4.99 | 0.467 | 9.33 | 0.9542 | 4340 | 17.9 | 13.1 |
| 354.06 | 0.876 | 5.97 | 1.08 | 1.42 | -3.3 | -1.22 | -- | 0.314 | 8.95 | 1.415 | 4359 | 17.7 | 13.2 |
| 340.24 | 0.859 | 5.95 | 2.04 | 1.57 | -3.53 | -- | -4.9 | 0.463 | 9.27 | 0.9447 | 4336 | 17.9 | 13.1 |
| 354.59 | 0.877 | 5.97 | 1.12 | 1.43 | -3.22 | -- | -- | 0.274 | 8.77 | 1.427 | 4358 | 17.6 | 13.1 |
| 451.43 | 0.99 | 5.98 | 2.09 | -- | -3.58 | -- | -4.86 | 0.484 | -- | 1.353 | 5829 | 17.9 | 13.1 |
| 581.39 | 1.13 | 5.89 | 1.24 | 1.66 | -- | -0.977 | -- | 0.761 | 9.33 | -- | -- | -- | -- |
| 584.71 | 1.13 | 5.9 | 1.2 | 1.67 | -- | -- | -- | 0.759 | 9.22 | -- | -- | -- | -- |
| 450.77 | 0.989 | 5.98 | 1.25 | -- | -3.51 | -- | -- | 0.399 | -- | 1.643 | 4399 | 17.6 | 13.2 |
| 380.23 | 0.908 | 5.96 | -- | 1.46 | -3.46 | -- | -- | 0.203 | 8.7 | 1.29 | 4359 | 17.7 | 14 |
| 746.93 | 1.28 | 5.94 | 1.2 | -- | -- | -- | -- | 0.767 | -- | -- | -- | -- | -- |
| 622.8 | 1.17 | 5.93 | -- | 1.67 | -- | -- | -- | 0.625 | 9.17 | -- | -- | -- | -- |
| 470.37 | 1.01 | 6.08 | -- | -- | -4.24 | -- | -- | 0.0233 | -- | 1.597 | 4403 | 17.7 | 16.3 |
| 784.65 | 1.31 | 5.97 | -- | -- | -- | -- | -- | 0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 328.40 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 4 | 329.64 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 12 | 331.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 29 | 332.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 30 | 332.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 33 | 332.78 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 38 | 332.86 | radiation | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 65 | 333.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 148 | 334.28 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 156 | 334.42 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 241 | 335.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 262 | 335.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 16 |
| 263 | 335.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 275 | 335.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 19 |
| 298 | 335.92 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 313 | 335.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 332 | 336.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 349 | 336.22 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 352 | 336.24 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 372 | 336.40 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 406 | 336.61 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 14 | NA |
| 456 | 336.83 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 16 | 20 |
| 460 | 336.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 478 | 336.90 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 483 | 336.93 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 484 | 336.93 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 579 | 337.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 585 | 337.15 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 590 | 337.16 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 602 | 337.18 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 614 | 337.19 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 645 | 337.24 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 662 | 337.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 728 | 337.51 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 830 | 337.93 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 8 |