Os04g0305700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0305700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 337.15 | 0.863 | 10.5 | -5.87 | 1.79 | 2.7 | 2.26 | -5.47 | -1.02 | 7.79 | 25.72 | 1307 | -- | -- |
| 345.92 | 0.866 | 10.4 | -4.47 | 1.79 | 2.19 | 2.23 | -- | -0.717 | 7.91 | 25.58 | 1275 | -- | -- |
| 351.67 | 0.873 | 10.6 | -5.91 | 1.8 | 2.74 | -- | -5.84 | -1.06 | 7.78 | 25.68 | 1294 | -- | -- |
| 361.92 | 0.886 | 10.4 | -4.39 | 1.78 | 2.15 | -- | -- | -0.702 | 7.82 | 25.65 | 1295 | -- | -- |
| 521.03 | 1.06 | 10.6 | -5.49 | -- | 2.58 | -- | -3.81 | -1.11 | -- | 24.4 | 1368 | -- | -- |
| 531.87 | 1.08 | 10.3 | -3.74 | 1.8 | -- | 2.49 | -- | -0.517 | 7.11 | -- | -- | -- | -- |
| 548.16 | 1.1 | 10.3 | -3.69 | 1.81 | -- | -- | -- | -0.523 | 7.09 | -- | -- | -- | -- |
| 527.05 | 1.07 | 10.5 | -4.44 | -- | 2.24 | -- | -- | -0.86 | -- | 24.12 | 1378 | -- | -- |
| 828.08 | 1.34 | 10.2 | -- | 1.98 | 1.42 | -- | -- | 0.0786 | 7.43 | 28.6 | 1264 | -- | -- |
| 720.76 | 1.25 | 10.4 | -3.65 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 906.46 | 1.41 | 10.2 | -- | 1.77 | -- | -- | -- | -0.112 | 7.22 | -- | -- | -- | -- |
| 988.61 | 1.46 | 10.2 | -- | -- | 1.26 | -- | -- | 0.203 | -- | 30.44 | 1349 | -- | -- |
| 1072.58 | 1.53 | 10.3 | -- | -- | -- | -- | -- | -0.0854 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 338.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 339.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 8 | 339.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 18 | 339.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 38 | 340.17 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 47 | 340.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 136 | 343.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 149 | 343.99 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 185 | 344.27 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 193 | 344.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 236 | 345.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 246 | 345.37 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 250 | 345.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 306 | 348.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 321 | 350.24 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 341 | 351.54 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 344 | 351.81 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 368 | 353.94 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 370 | 354.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 382 | 354.38 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 383 | 354.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 6 |
| 387 | 354.45 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 394 | 354.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 396 | 354.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 400 | 354.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 406 | 354.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 414 | 354.84 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 416 | 354.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 464 | 355.44 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 473 | 355.57 | temperature | 30 | 1440 | < th | dose independent | sin | 20 | NA |
| 501 | 356.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 539 | 356.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 546 | 357.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 549 | 357.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 604 | 357.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 609 | 357.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 617 | 357.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 619 | 357.28 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 636 | 357.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 699 | 357.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 778 | 358.16 | temperature | 30 | 1440 | > th | dose independent | sin | 18 | NA |
| 789 | 358.39 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 793 | 358.46 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 803 | 358.60 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 858 | 359.18 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 862 | 359.23 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 863 | 359.24 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 868 | 359.34 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 900 | 359.57 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 916 | 359.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 945 | 359.81 | wind | 5 | 43200 | > th | dose independent | sin | 3 | NA |
| 953 | 359.94 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 974 | 360.14 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 984 | 360.25 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |