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Os04g0304000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0229) R2 : 0.0077
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0909 (0.0483) R2dN8 : 0.00995 R2N8 : 0.0077
σ : 0.432
deviance : 85.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.27 0.34 7.05 -0.578 0.439 -0.358 -0.568 -0.994 -0.0416 12.3 70.03 2687 -- --
53.51 0.341 7.04 -0.537 0.43 -0.434 -0.516 -- -0.0179 12.3 71.76 2625 -- --
53.64 0.341 7.05 -0.599 0.444 -0.352 -- -0.895 -0.043 12.3 69.59 2693 -- --
54.62 0.344 7.04 -0.549 0.425 -0.434 -- -- -0.0225 12.4 71.92 2629 -- --
64.99 0.375 7.05 -0.527 -- -0.564 -- -0.496 -0.0377 -- 75.05 2514 -- --
58.64 0.359 7.02 -0.608 0.494 -- -0.432 -- 0.0298 12.4 -- -- -- --
59.44 0.361 7.02 -0.625 0.495 -- -- -- 0.0276 12.4 -- -- -- --
65.03 0.376 7.04 -0.559 -- -0.645 -- -- -0.00957 -- 80.94 2485 -- --
61.8 0.366 7.03 -- 0.4 -0.782 -- -- -0.0294 12.8 56.53 2611 -- --
74.86 0.404 7.03 -0.641 -- -- -- -- 0.0197 -- -- -- -- --
69.73 0.391 7.01 -- 0.504 -- -- -- 0.0972 12.4 -- -- -- --
72.88 0.398 7.03 -- -- -0.706 -- -- 0.0176 -- 75.28 2490 -- --
85.72 0.432 7.02 -- -- -- -- -- 0.0909 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.89 radiation 30.0 270 < th dose independent rect. 10 14
3 50.19 radiation 40.0 270 < th dose dependent rect. 9 15
12 50.58 humidity 50.0 270 > th dose independent rect. 6 18
17 50.69 radiation 10.0 270 < th dose independent rect. 7 17
22 50.74 humidity 50.0 270 > th dose independent rect. 5 20
30 50.88 humidity 50.0 4320 < th dose independent rect. 15 2
33 50.91 humidity 50.0 4320 > th dose independent sin 13 NA
34 50.91 humidity 50.0 4320 > th dose independent rect. 15 2
35 50.92 radiation 40.0 270 < th dose independent rect. 19 19
38 50.94 humidity 50.0 4320 < th dose independent sin 12 NA
40 50.95 wind 9.0 43200 > th dose independent rect. 11 2
41 50.98 temperature 25.0 270 < th dose independent rect. 24 6
43 50.99 humidity 50.0 4320 > th dose independent rect. 14 12
44 50.99 humidity 50.0 4320 > th dose independent rect. 14 14
46 51.00 humidity 50.0 4320 > th dose independent rect. 14 9
52 51.01 humidity 50.0 4320 > th dose independent rect. 14 4
54 51.01 humidity 50.0 4320 > th dose independent rect. 14 7
57 51.01 humidity 50.0 4320 > th dose independent rect. 14 19
64 51.03 humidity 50.0 4320 < th dose independent rect. 15 20
68 51.04 wind 9.0 43200 > th dose dependent rect. 11 2
76 51.06 humidity 50.0 4320 < th dose independent rect. 14 4
108 51.09 radiation 10.0 270 < th dose independent rect. 14 11
140 51.18 wind 3.0 4320 < th dose independent rect. 8 2
144 51.20 radiation 40.0 270 < th dose independent rect. 6 8
162 51.32 radiation 10.0 4320 < th dose dependent rect. 7 1
164 51.33 radiation 10.0 270 < th dose dependent rect. 7 18
168 51.34 wind 9.0 43200 < th dose independent rect. 11 1
170 51.35 wind 1.0 14400 > th dose independent rect. 17 4
173 51.35 radiation 10.0 4320 < th dose dependent rect. 7 3
179 51.39 humidity 50.0 4320 < th dose dependent sin 11 NA
180 51.39 radiation 10.0 270 < th dose dependent rect. 14 11
205 51.44 radiation 1.0 4320 > th dose dependent rect. 7 1
210 51.46 radiation 40.0 4320 < th dose dependent rect. 7 1
216 51.49 radiation 20.0 4320 > th dose dependent rect. 16 16
219 51.50 humidity 60.0 4320 < th dose dependent rect. 15 4
234 51.51 wind 3.0 4320 > th dose independent rect. 8 2
241 51.52 radiation 20.0 4320 < th dose independent rect. 6 2
242 51.52 radiation 20.0 4320 < th dose independent rect. 22 10
252 51.54 radiation 20.0 4320 < th dose independent rect. 24 8
262 51.57 humidity 70.0 270 > th dose independent rect. 15 10
267 51.58 humidity 50.0 270 > th dose independent rect. 5 9
297 51.62 precipitation 0.1 43200 > th dose independent rect. 22 1
298 51.62 precipitation 0.1 43200 > th dose dependent rect. 22 1
305 51.65 humidity 60.0 270 > th dose independent rect. 17 8
313 51.67 precipitation 0.1 43200 > th dose dependent rect. 19 5
314 51.68 precipitation 0.1 43200 < th dose independent rect. 22 1
316 51.68 precipitation 0.1 43200 < th dose dependent rect. 22 1
332 51.74 wind 1.0 14400 > th dose independent rect. 20 1
336 51.75 precipitation 0.1 43200 > th dose dependent rect. 19 3
345 51.77 temperature 25.0 270 < th dose independent rect. 24 11
353 51.78 radiation 20.0 43200 > th dose independent rect. 10 2
364 51.80 humidity 70.0 270 > th dose independent rect. 11 13
376 51.84 precipitation 0.1 43200 < th dose independent rect. 19 5
377 51.84 precipitation 0.1 43200 < th dose dependent rect. 19 5
382 51.86 precipitation 0.1 43200 > th dose independent rect. 19 5
386 51.86 radiation 20.0 43200 < th dose dependent rect. 10 1
388 51.87 precipitation 0.1 270 < th dose independent rect. 14 15
391 51.87 precipitation 0.1 270 < th dose dependent rect. 14 15
402 51.91 radiation 10.0 43200 < th dose dependent rect. 8 1
421 51.94 radiation 10.0 43200 < th dose dependent rect. 7 7
440 51.98 precipitation 0.1 43200 < th dose independent rect. 20 1
443 51.98 precipitation 0.1 43200 < th dose dependent rect. 20 1
445 51.99 temperature 30.0 270 < th dose independent rect. 18 7
452 52.00 radiation 20.0 43200 < th dose dependent rect. 9 4
461 52.02 temperature 30.0 270 < th dose dependent rect. 24 6
464 52.03 atmosphere 995.0 270 > th dose independent rect. 14 15
487 52.07 precipitation 0.1 43200 > th dose independent rect. 20 1
502 52.07 atmosphere 995.0 270 > th dose independent rect. 1 17
510 52.08 radiation 10.0 43200 < th dose dependent rect. 7 4
513 52.09 wind 9.0 43200 > th dose independent rect. 21 17
520 52.11 precipitation 0.1 270 < th dose independent rect. 1 16
525 52.11 precipitation 0.1 270 < th dose dependent rect. 1 16
533 52.13 atmosphere 995.0 270 > th dose independent rect. 24 19
541 52.14 humidity 50.0 270 > th dose dependent rect. 7 17
545 52.15 precipitation 0.1 43200 > th dose dependent rect. 16 1
548 52.15 humidity 50.0 270 > th dose dependent rect. 17 7
556 52.16 humidity 50.0 270 > th dose dependent rect. 9 15
594 52.20 precipitation 0.1 43200 > th dose dependent rect. 8 16
605 52.22 wind 9.0 43200 < th dose independent rect. 21 17
626 52.24 wind 9.0 43200 < th dose independent rect. 10 4
630 52.24 humidity 50.0 4320 > th dose independent rect. 15 23
656 52.26 wind 1.0 14400 < th dose dependent rect. 16 11
664 52.27 precipitation 0.1 43200 < th dose independent rect. 16 1
665 52.27 wind 1.0 270 > th dose independent rect. 11 8
667 52.27 precipitation 0.1 270 < th dose independent rect. 24 19
668 52.27 precipitation 0.1 43200 < th dose dependent rect. 16 1
672 52.27 precipitation 0.1 270 < th dose dependent rect. 24 19
678 52.28 precipitation 0.1 43200 > th dose dependent rect. 8 13
691 52.29 precipitation 0.1 43200 > th dose dependent rect. 12 12
694 52.30 precipitation 0.1 43200 > th dose independent rect. 16 1
708 52.31 humidity 50.0 270 > th dose independent rect. 17 22
716 52.32 precipitation 0.1 270 < th dose independent rect. 5 9
720 52.32 precipitation 0.1 270 < th dose dependent rect. 5 9
721 52.32 radiation 40.0 4320 < th dose dependent rect. 22 10
738 52.33 radiation 40.0 4320 < th dose dependent rect. 24 8
748 52.34 temperature 25.0 14400 > th dose independent rect. 11 1
752 52.34 precipitation 0.1 43200 < th dose independent rect. 17 7
753 52.34 wind 9.0 270 < th dose independent rect. 17 8
754 52.34 temperature 10.0 270 > th dose independent rect. 5 9
755 52.34 atmosphere 995.0 270 > th dose independent rect. 5 9
756 52.34 atmosphere 1015.0 270 < th dose independent rect. 5 9
757 52.34 temperature 25.0 270 < th dose independent rect. 24 13
758 52.34 temperature 10.0 270 > th dose independent rect. 14 15
761 52.34 precipitation 0.1 43200 > th dose dependent sin 20 NA
763 52.34 precipitation 0.1 43200 < th dose dependent rect. 17 7
779 52.36 radiation 10.0 4320 < th dose independent rect. 9 1
781 52.36 temperature 25.0 270 < th dose independent rect. 24 18
794 52.37 wind 9.0 270 < th dose independent rect. 5 9
799 52.37 radiation 30.0 14400 > th dose independent rect. 16 16
825 52.38 radiation 40.0 43200 < th dose independent rect. 16 15
841 52.39 radiation 10.0 270 < th dose independent sin 15 NA
843 52.39 radiation 40.0 43200 < th dose independent rect. 16 4
848 52.39 precipitation 0.1 43200 > th dose independent rect. 17 7
855 52.39 humidity 90.0 14400 < th dose dependent rect. 3 1
870 52.40 radiation 10.0 43200 > th dose independent rect. 7 3
871 52.40 temperature 10.0 270 > th dose independent rect. 17 8
878 52.40 temperature 10.0 270 > th dose independent rect. 1 16
879 52.40 atmosphere 1015.0 270 < th dose independent rect. 1 16
888 52.40 humidity 50.0 270 > th dose dependent rect. 24 7
923 52.41 wind 3.0 4320 < th dose dependent rect. 8 1
949 52.43 wind 7.0 270 < th dose independent rect. 19 5
961 52.43 wind 9.0 43200 > th dose independent rect. 1 13
972 52.43 radiation 10.0 43200 > th dose independent rect. 17 21