Os04g0303300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os04g0303300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.68 | 0.616 | 5.81 | 0.25 | 0.832 | 2.52 | 0.0987 | -0.343 | 0.529 | 3.94 | 19.97 | 3695 | -- | -- |
| 171.45 | 0.61 | 5.8 | 0.316 | 0.83 | 2.66 | 0.0827 | -- | 0.559 | 3.93 | 19.8 | 3683 | -- | -- |
| 171.42 | 0.61 | 5.8 | 0.318 | 0.82 | 2.65 | -- | -0.0811 | 0.561 | 4 | 19.6 | 3681 | -- | -- |
| 171.34 | 0.61 | 5.8 | 0.308 | 0.834 | 2.69 | -- | -- | 0.566 | 3.93 | 19.65 | 3676 | -- | -- |
| 207.27 | 0.671 | 5.81 | 0.263 | -- | 2.78 | -- | 0.0813 | 0.547 | -- | 19.7 | 3878 | -- | -- |
| 287.7 | 0.795 | 5.65 | 1.81 | 0.903 | -- | -0.0544 | -- | 1.21 | 3.55 | -- | -- | -- | -- |
| 287.71 | 0.794 | 5.65 | 1.81 | 0.903 | -- | -- | -- | 1.21 | 3.54 | -- | -- | -- | -- |
| 207.29 | 0.671 | 5.81 | 0.245 | -- | 2.77 | -- | -- | 0.545 | -- | 19.71 | 3888 | -- | -- |
| 172.94 | 0.612 | 5.81 | -- | 0.815 | 2.88 | -- | -- | 0.496 | 3.92 | 19.61 | 3792 | -- | -- |
| 333.21 | 0.853 | 5.65 | 1.85 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 374.06 | 0.905 | 5.7 | -- | 0.939 | -- | -- | -- | 1.01 | 3.53 | -- | -- | -- | -- |
| 208.32 | 0.672 | 5.82 | -- | -- | 2.92 | -- | -- | 0.488 | -- | 19.78 | 3900 | -- | -- |
| 423.29 | 0.96 | 5.7 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.68 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 2 | 169.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 169.63 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 6 | 170.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 11 | 170.69 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 16 | 170.86 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 18 | 171.24 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 20 | 171.54 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 22 | 171.70 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 26 | 172.27 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 28 | 172.34 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 30 | 172.43 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 31 | 172.43 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 39 | 172.58 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 44 | 172.64 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 45 | 172.64 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 56 | 172.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 68 | 173.09 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 87 | 173.25 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 98 | 173.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 115 | 173.49 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 120 | 173.52 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 132 | 173.56 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 143 | 173.59 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 149 | 173.63 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 15 | NA |
| 153 | 173.64 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 219 | 173.84 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 243 | 173.89 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 266 | 173.94 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 392 | 174.16 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 17 | NA |
| 393 | 174.16 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 427 | 174.20 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 499 | 174.26 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 18 | NA |
| 526 | 174.28 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 591 | 174.38 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 611 | 174.40 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 662 | 174.47 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 17 |
| 664 | 174.48 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 689 | 174.50 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 701 | 174.52 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 715 | 174.54 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 719 | 174.54 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 19 |
| 757 | 174.58 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 941 | 174.76 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 962 | 174.79 | atmosphere | 1010 | 43200 | < th | dose independent | no | NA | NA |
| 972 | 174.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 1000 | 174.83 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 19 | 23 |