Os04g0295000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase inhibitor family protein.
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Os04g0295000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase inhibitor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.92 | 0.278 | 9.97 | -0.759 | 0.257 | 0.288 | -0.0381 | -0.917 | -0.244 | 5.66 | 19.5 | 886 | -- | -- |
| 36.16 | 0.28 | 9.94 | -0.642 | 0.265 | 0.512 | -0.179 | -- | -0.186 | 5.52 | 18.6 | 858 | -- | -- |
| 34.91 | 0.275 | 9.97 | -0.761 | 0.255 | 0.292 | -- | -0.911 | -0.244 | 5.7 | 19.5 | 905 | -- | -- |
| 36 | 0.279 | 9.95 | -0.656 | 0.247 | 0.624 | -- | -- | -0.212 | 6.04 | 18.31 | 850 | -- | -- |
| 38.3 | 0.288 | 9.97 | -0.748 | -- | 0.296 | -- | -0.896 | -0.236 | -- | 19.4 | 909 | -- | -- |
| 40.58 | 0.299 | 9.94 | -0.478 | 0.253 | -- | -0.257 | -- | -0.142 | 4.57 | -- | -- | -- | -- |
| 40.7 | 0.299 | 9.93 | -0.476 | 0.255 | -- | -- | -- | -0.141 | 5.05 | -- | -- | -- | -- |
| 39.17 | 0.291 | 9.95 | -0.637 | -- | 0.614 | -- | -- | -0.199 | -- | 18.4 | 898 | -- | -- |
| 45.6 | 0.314 | 9.93 | -- | 0.239 | 0.33 | -- | -- | -0.0969 | 5.82 | 17.9 | 782 | -- | -- |
| 44.12 | 0.31 | 9.94 | -0.467 | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
| 46.67 | 0.32 | 9.92 | -- | 0.247 | -- | -- | -- | -0.0879 | 5.11 | -- | -- | -- | -- |
| 48.5 | 0.324 | 9.93 | -- | -- | 0.351 | -- | -- | -0.103 | -- | 17.89 | 844 | -- | -- |
| 49.87 | 0.33 | 9.93 | -- | -- | -- | -- | -- | -0.0826 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.31 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 2 | 31.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 31.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 12 | 31.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 41 | 32.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 55 | 32.40 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 58 | 32.41 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 110 | 32.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 130 | 32.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 173 | 33.01 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 221 | 33.26 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 254 | 33.38 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 404 | 33.86 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 422 | 33.91 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 667 | 34.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 771 | 34.56 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 820 | 34.66 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 846 | 34.71 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 852 | 34.72 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 889 | 34.77 | radiation | 1 | 720 | < th | dose dependent | rect. | 24 | 7 |