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Os04g0286400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0195) R2 : 0.011
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0925 (0.0412) R2dN8 : 0.0141 R2N8 : 0.011
σ : 0.368
deviance : 62.21
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.56 0.272 11.3 0.611 0.299 -0.681 1.06 -0.194 0.11 23 80.09 1769 -- --
33.62 0.27 11.3 0.621 0.302 -0.69 1.06 -- 0.11 23 80 1770 -- --
38.3 0.288 11.3 0.568 0.3 -0.684 -- -0.2 0.109 23 81.01 1774 -- --
38.38 0.289 11.3 0.577 0.294 -0.684 -- -- 0.113 23.1 80.94 1776 -- --
43.17 0.306 11.3 0.554 -- -0.674 -- -0.279 0.118 -- 83 1678 -- --
46.51 0.32 11.3 0.514 0.301 -- 0.949 -- 0.147 23.9 -- -- -- --
50.22 0.332 11.3 0.474 0.304 -- -- -- 0.141 0.707 -- -- -- --
43.28 0.306 11.3 0.577 -- -0.699 -- -- 0.123 -- 83 1689 -- --
46.99 0.319 11.3 -- 0.293 -0.673 -- -- 0.115 23.1 119.6 1778 -- --
56 0.35 11.3 0.485 -- -- -- -- 0.146 -- -- -- -- --
56.16 0.351 11.3 -- 0.311 -- -- -- 0.0881 0.779 -- -- -- --
51.73 0.335 11.3 -- -- -0.668 -- -- 0.116 -- 109.3 1667 -- --
62.21 0.368 11.3 -- -- -- -- -- 0.0925 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.42 temperature 10 270 > th dose dependent rect. 1 16
2 31.53 radiation 10 90 < th dose dependent sin 15 NA
3 31.62 temperature 10 90 > th dose dependent rect. 3 15
4 31.63 radiation 10 270 < th dose dependent rect. 6 19
12 31.86 radiation 10 270 < th dose dependent sin 19 NA
13 31.87 radiation 10 90 < th dose dependent rect. 13 14
14 31.90 radiation 10 90 < th dose dependent rect. 11 16
25 32.25 radiation 40 270 < th dose dependent sin 17 NA
33 32.36 radiation 1 90 < th dose independent rect. 9 18
35 32.36 temperature 20 270 > th dose dependent rect. 11 6
37 32.40 radiation 1 90 < th dose independent rect. 12 15
44 32.44 radiation 10 270 < th dose independent sin 17 NA
58 32.62 humidity 90 90 < th dose dependent rect. 13 6
63 32.68 radiation 1 270 > th dose dependent sin 16 NA
80 32.81 humidity 90 270 < th dose dependent rect. 11 6
81 32.81 radiation 30 270 < th dose dependent rect. 14 11
83 32.82 temperature 30 90 < th dose independent rect. 17 10
102 32.93 humidity 60 90 > th dose independent rect. 17 10
103 32.93 temperature 25 90 > th dose dependent rect. 13 6
125 33.05 temperature 25 270 > th dose dependent rect. 13 3
135 33.13 radiation 10 270 > th dose independent rect. 12 6
161 33.17 radiation 1 270 > th dose dependent rect. 13 17
164 33.18 radiation 1 270 > th dose dependent rect. 13 5
187 33.22 humidity 50 270 > th dose dependent rect. 5 20
207 33.29 radiation 10 270 > th dose independent sin 17 NA
209 33.30 radiation 1 90 > th dose independent sin 15 NA
273 33.45 humidity 90 90 < th dose dependent rect. 13 8
283 33.48 humidity 90 90 < th dose dependent rect. 13 12
294 33.51 humidity 90 270 < th dose dependent rect. 13 3
301 33.53 humidity 90 90 < th dose dependent rect. 13 14
319 33.57 humidity 50 270 > th dose dependent rect. 6 17
322 33.60 temperature 25 90 > th dose dependent sin 18 NA
342 33.65 humidity 80 90 < th dose dependent sin 17 NA
524 33.96 temperature 25 90 > th dose dependent rect. 13 18
546 34.01 temperature 25 90 > th dose dependent rect. 13 15
552 34.02 humidity 70 270 < th dose independent rect. 11 7
585 34.06 humidity 50 270 > th dose independent rect. 15 22
612 34.14 humidity 80 270 < th dose independent rect. 12 5
623 34.15 temperature 10 270 > th dose dependent rect. 11 18
624 34.17 humidity 80 270 < th dose independent rect. 13 3
670 34.24 radiation 10 1440 > th dose independent rect. 15 18
690 34.27 humidity 50 90 > th dose dependent sin 17 NA
694 34.28 humidity 80 1440 < th dose independent rect. 7 7
705 34.30 humidity 80 1440 > th dose independent rect. 7 8
709 34.31 radiation 10 1440 > th dose independent sin 12 NA
712 34.31 temperature 30 270 < th dose independent rect. 15 21
746 34.36 humidity 70 270 > th dose independent rect. 5 21
769 34.40 humidity 50 90 > th dose dependent rect. 17 10
773 34.41 radiation 20 1440 < th dose independent rect. 16 16
798 34.43 humidity 80 10 < th dose dependent rect. 14 10
823 34.45 humidity 80 10 < th dose dependent rect. 14 8
853 34.49 temperature 25 270 > th dose dependent sin 22 NA
859 34.49 radiation 30 1440 < th dose dependent rect. 15 18
869 34.50 humidity 50 1440 > th dose dependent rect. 7 12
902 34.54 radiation 10 1440 > th dose dependent rect. 15 18
926 34.58 radiation 20 1440 > th dose independent rect. 16 16
943 34.60 humidity 90 1440 < th dose dependent rect. 6 13
976 34.63 radiation 10 1440 > th dose dependent sin 12 NA