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Os04g0283900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.31 (0.0207) R2 : 0.591
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.709 (0.0542) R2dC : 0.164 R2C : -0.00587
β3 : -1.65 (0.0689) R2dE : 0.559 R2E : 0.374
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.275 (0.0437) R2dN8 : 0.0478 R2N8 : 0.0309
σ : 0.389
deviance : 69.89
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C
peak time of C : 15.4
E
wheather : humidity
threshold : 39.97
memory length : 254
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.33
open length of G : 5.69

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.63 0.381 9.3 0.281 0.708 -1.63 -0.929 -0.0383 -0.25 15.7 45.87 273 5.2 5.83
65.53 0.377 9.3 0.295 0.712 -1.62 -0.968 -- -0.24 15.6 42.78 270 5.23 5.8
68.05 0.384 9.3 0.284 0.687 -1.62 -- -0.166 -0.238 15.6 44.22 261 5.27 5.78
68.09 0.384 9.31 0.282 0.711 -1.63 -- -- -0.255 15.5 40.76 261 5.35 5.68
86.66 0.434 9.29 0.238 -- -1.45 -- -0.0365 -0.225 -- 41 177 5.24 5.75
97.06 0.462 9.32 0.297 1.11 -- -0.337 -- -0.208 19.7 -- -- -- --
97.36 0.462 9.32 0.304 1.1 -- -- -- -0.209 19.8 -- -- -- --
86.63 0.433 9.29 0.258 -- -1.44 -- -- -0.22 -- 39.52 178 5.2 5.79
69.89 0.389 9.31 -- 0.709 -1.65 -- -- -0.275 15.4 39.97 254 5.33 5.69
163.32 0.597 9.3 0.291 -- -- -- -- -0.225 -- -- -- -- --
99.8 0.467 9.33 -- 1.1 -- -- -- -0.243 19.8 -- -- -- --
88.28 0.438 9.3 -- -- -1.42 -- -- -0.237 -- 31.09 148 5.3 5.73
165.55 0.601 9.3 -- -- -- -- -- -0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.56 humidity 50.0 270 > th dose dependent rect. 5 6
6 68.21 humidity 60.0 270 > th dose independent rect. 5 6
9 69.12 humidity 70.0 270 > th dose independent rect. 6 4
16 70.01 temperature 10.0 270 > th dose dependent rect. 5 6
22 70.46 precipitation 0.1 270 < th dose independent rect. 11 18
23 70.46 precipitation 0.1 270 < th dose dependent rect. 11 18
28 70.79 temperature 10.0 270 > th dose independent rect. 5 6
29 70.79 atmosphere 995.0 270 > th dose independent rect. 5 6
30 70.79 atmosphere 1015.0 270 < th dose independent rect. 5 6
31 70.79 temperature 10.0 270 > th dose independent rect. 11 18
32 70.82 wind 9.0 270 < th dose independent rect. 5 6
33 70.87 wind 9.0 270 < th dose dependent rect. 5 6
34 70.88 precipitation 0.1 270 < th dose independent rect. 5 6
35 70.88 precipitation 0.1 270 < th dose dependent rect. 5 6
38 71.05 wind 1.0 270 > th dose independent rect. 4 7
41 71.46 wind 9.0 270 < th dose independent rect. 11 18
46 71.62 wind 9.0 270 < th dose independent rect. 6 15
49 71.69 atmosphere 995.0 270 > th dose independent rect. 11 18
50 71.79 precipitation 0.1 270 < th dose independent rect. 21 9
51 71.79 precipitation 0.1 270 < th dose dependent rect. 21 9
52 71.85 wind 9.0 270 < th dose independent rect. 21 9
53 71.86 wind 1.0 90 > th dose independent rect. 19 16
54 71.88 radiation 40.0 270 < th dose independent rect. 5 6
55 71.88 temperature 10.0 270 > th dose independent rect. 21 9
56 71.88 temperature 30.0 270 < th dose independent rect. 21 9
57 71.88 humidity 50.0 270 > th dose independent rect. 21 9
60 71.88 atmosphere 995.0 270 > th dose independent rect. 21 9
61 71.88 radiation 20.0 270 < th dose independent rect. 21 9
64 71.88 temperature 10.0 270 > th dose independent rect. 6 15
67 71.98 atmosphere 1015.0 270 < th dose independent rect. 6 15
68 72.01 humidity 60.0 90 > th dose independent rect. 19 16
71 72.06 humidity 80.0 270 > th dose independent rect. 7 1
73 72.09 radiation 1.0 270 > th dose independent rect. 10 7
74 72.10 radiation 40.0 270 < th dose dependent rect. 21 9
82 72.33 humidity 60.0 270 > th dose independent rect. 17 17
91 72.51 radiation 40.0 270 < th dose dependent rect. 6 3
94 72.54 temperature 30.0 270 < th dose independent rect. 5 6
99 72.62 wind 5.0 270 < th dose independent rect. 6 4
123 72.76 temperature 20.0 270 > th dose independent rect. 6 4
130 72.84 wind 9.0 270 < th dose dependent rect. 21 9
138 72.91 precipitation 0.1 270 < th dose independent rect. 10 7
139 72.91 precipitation 0.1 270 < th dose dependent rect. 10 7
141 72.97 wind 9.0 270 < th dose independent rect. 17 17
144 72.98 temperature 10.0 270 > th dose independent rect. 10 7
145 72.98 atmosphere 1015.0 270 < th dose independent rect. 10 7
146 72.98 temperature 10.0 270 > th dose independent rect. 17 17
150 73.02 wind 1.0 270 > th dose independent rect. 10 7
153 73.05 humidity 50.0 270 > th dose dependent rect. 22 7
154 73.08 radiation 30.0 270 < th dose independent rect. 6 3
160 73.12 humidity 50.0 10 > th dose dependent rect. 7 6
161 73.12 humidity 50.0 270 > th dose dependent rect. 21 9
178 73.26 precipitation 0.1 270 < th dose independent rect. 6 15
180 73.26 precipitation 0.1 90 < th dose independent rect. 13 17
181 73.26 precipitation 0.1 270 < th dose dependent rect. 6 15
182 73.26 precipitation 0.1 90 < th dose dependent rect. 13 17
187 73.28 temperature 10.0 90 > th dose independent rect. 13 17
198 73.36 humidity 50.0 10 > th dose independent rect. 6 7
214 73.50 temperature 10.0 90 > th dose independent rect. 19 16
215 73.50 atmosphere 995.0 90 > th dose independent rect. 19 16
216 73.50 radiation 40.0 270 < th dose independent rect. 17 17
241 73.61 atmosphere 995.0 270 > th dose independent rect. 10 7
248 73.78 wind 9.0 90 < th dose independent rect. 19 16
250 73.80 atmosphere 995.0 270 > th dose independent rect. 17 17
254 73.83 wind 9.0 90 < th dose independent rect. 13 17
270 73.88 radiation 40.0 270 < th dose dependent rect. 7 1
272 73.90 wind 9.0 270 < th dose independent rect. 10 7
273 73.90 wind 1.0 270 > th dose independent rect. 11 17
290 73.96 precipitation 0.1 270 < th dose independent rect. 17 17
292 73.96 precipitation 0.1 270 < th dose dependent rect. 17 17
297 74.03 radiation 40.0 10 < th dose independent rect. 12 18
308 74.15 precipitation 0.1 90 < th dose independent rect. 19 16
309 74.15 precipitation 0.1 90 < th dose dependent rect. 19 16
388 74.61 atmosphere 995.0 90 > th dose independent rect. 13 17
407 74.75 temperature 10.0 10 > th dose independent rect. 6 7
409 74.75 atmosphere 995.0 10 > th dose independent rect. 6 7
410 74.75 atmosphere 1015.0 10 < th dose independent rect. 6 7
411 74.75 temperature 10.0 10 > th dose independent rect. 13 17
421 74.81 precipitation 0.1 10 < th dose independent rect. 6 7
423 74.81 precipitation 0.1 10 < th dose dependent rect. 6 7
431 74.88 wind 1.0 10 > th dose independent rect. 6 7
449 74.94 temperature 10.0 10 > th dose dependent rect. 6 7
450 74.97 temperature 30.0 90 < th dose independent rect. 19 16
452 74.98 temperature 10.0 270 > th dose dependent rect. 22 8
461 75.04 wind 9.0 10 < th dose independent rect. 6 7
492 75.19 temperature 10.0 1440 > th dose independent rect. 7 7
495 75.19 atmosphere 995.0 1440 > th dose independent rect. 7 7
496 75.19 temperature 10.0 1440 > th dose independent rect. 14 17
505 75.28 wind 9.0 10 < th dose independent rect. 13 17
535 75.48 radiation 1.0 270 < th dose dependent sin 8 NA
541 75.53 atmosphere 1015.0 270 < th dose independent rect. 22 8
588 75.67 radiation 20.0 270 < th dose independent rect. 7 1
597 75.69 radiation 30.0 270 < th dose independent rect. 15 10
620 75.78 atmosphere 995.0 270 > th dose dependent rect. 11 6
622 75.80 radiation 1.0 90 > th dose independent rect. 6 7
647 75.88 atmosphere 1015.0 270 < th dose independent rect. 11 18
661 75.94 radiation 1.0 10 > th dose independent rect. 6 7
671 75.96 radiation 1.0 270 < th dose dependent rect. 22 11
714 76.05 atmosphere 995.0 10 > th dose independent rect. 13 17
742 76.13 radiation 1.0 270 > th dose independent rect. 18 17
757 76.21 humidity 90.0 270 < th dose independent rect. 11 6
789 76.35 wind 1.0 270 > th dose independent rect. 6 16
794 76.37 wind 9.0 270 < th dose independent rect. 15 10
795 76.38 radiation 1.0 270 > th dose independent rect. 4 7
811 76.40 radiation 40.0 270 < th dose independent rect. 6 16
842 76.46 temperature 10.0 270 > th dose independent rect. 15 10
843 76.46 temperature 10.0 270 > th dose independent rect. 1 14
844 76.46 atmosphere 1015.0 270 < th dose independent rect. 1 14
851 76.48 precipitation 0.1 270 < th dose independent rect. 1 15
852 76.48 precipitation 0.1 270 < th dose dependent rect. 1 15
881 76.55 humidity 50.0 270 > th dose independent rect. 5 16
893 76.59 atmosphere 995.0 270 > th dose independent rect. 1 14
901 76.64 radiation 1.0 270 > th dose independent rect. 6 4
918 76.68 atmosphere 1015.0 270 < th dose independent rect. 17 17
930 76.72 humidity 50.0 270 > th dose dependent rect. 6 15
964 76.79 atmosphere 1015.0 90 < th dose independent rect. 19 16
965 76.79 atmosphere 995.0 90 > th dose dependent rect. 13 17
967 76.80 atmosphere 995.0 270 > th dose independent rect. 6 16
972 76.81 humidity 70.0 270 > th dose independent rect. 5 17