Os04g0271700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0271700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.19 | 0.721 | 8.83 | -1.97 | 1.15 | 1.95 | 2.09 | -1.58 | -0.28 | 3.5 | 83.22 | 1345 | -- | -- |
| 238.18 | 0.719 | 8.83 | -1.85 | 1.11 | 2 | 2.07 | -- | -0.259 | 3.63 | 83.67 | 1307 | -- | -- |
| 247.97 | 0.733 | 8.84 | -1.98 | 1.15 | 1.98 | -- | -1.17 | -0.278 | 3.58 | 82 | 1326 | -- | -- |
| 249.16 | 0.735 | 8.81 | -1.89 | 1.1 | 1.93 | -- | -- | -0.256 | 3.96 | 82 | 1282 | -- | -- |
| 309.12 | 0.819 | 8.83 | -1.96 | -- | 2.39 | -- | -1.07 | -0.266 | -- | 84.73 | 1243 | -- | -- |
| 316.78 | 0.834 | 8.82 | -1.54 | 1.34 | -- | 2.33 | -- | -0.299 | 3.33 | -- | -- | -- | -- |
| 333.9 | 0.856 | 8.83 | -1.59 | 1.35 | -- | -- | -- | -0.313 | 3.48 | -- | -- | -- | -- |
| 310.14 | 0.82 | 8.82 | -1.84 | -- | 2.31 | -- | -- | -0.258 | -- | 85.56 | 1240 | -- | -- |
| 332.53 | 0.849 | 8.8 | -- | 1.08 | 1.78 | -- | -- | -0.191 | 3.87 | 105.9 | 1299 | -- | -- |
| 436.61 | 0.976 | 8.83 | -1.53 | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
| 400.38 | 0.936 | 8.79 | -- | 1.32 | -- | -- | -- | -0.136 | 3.48 | -- | -- | -- | -- |
| 389.73 | 0.919 | 8.8 | -- | -- | 2.26 | -- | -- | -0.179 | -- | 130.4 | 1230 | -- | -- |
| 498.45 | 1.04 | 8.79 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 228.28 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 19 | 230.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 35 | 231.92 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 39 | 232.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 43 | 232.99 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 73 | 234.53 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 75 | 234.63 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 79 | 234.77 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 84 | 234.86 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 86 | 234.92 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 120 | 236.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 146 | 237.73 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 150 | 237.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 179 | 238.51 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 190 | 238.76 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 194 | 238.81 | humidity | 90 | 1440 | < th | dose dependent | sin | 23 | NA |
| 202 | 238.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 211 | 239.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 214 | 239.06 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 227 | 239.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 262 | 239.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 326 | 239.96 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 421 | 240.37 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 13 |
| 436 | 240.45 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 441 | 240.48 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 594 | 241.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 667 | 241.81 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 699 | 241.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 701 | 241.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 752 | 242.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 755 | 242.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 758 | 242.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 768 | 242.43 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 794 | 242.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 814 | 242.65 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 821 | 242.69 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 881 | 243.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 916 | 243.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |