Os04g0259800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0259800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.74 | 0.505 | 8.69 | -2.68 | 0.135 | -0.485 | -0.354 | -2.54 | 0.422 | 18 | 35.83 | 3149 | -- | -- |
| 122.85 | 0.516 | 8.69 | -2.44 | 0.147 | -0.52 | -0.482 | -- | 0.502 | 17.5 | 26.01 | 2709 | -- | -- |
| 116.04 | 0.502 | 8.69 | -2.67 | 0.134 | -0.481 | -- | -2.55 | 0.421 | 18.1 | 35.87 | 3158 | -- | -- |
| 123.19 | 0.517 | 8.69 | -2.43 | 0.155 | -0.534 | -- | -- | 0.496 | 18.8 | 27.83 | 2709 | -- | -- |
| 116.96 | 0.504 | 8.69 | -2.68 | -- | -0.471 | -- | -2.6 | 0.417 | -- | 35.84 | 3149 | -- | -- |
| 131.17 | 0.537 | 8.7 | -2.45 | 0.151 | -- | -0.385 | -- | 0.414 | 16.9 | -- | -- | -- | -- |
| 131.55 | 0.537 | 8.71 | -2.45 | 0.148 | -- | -- | -- | 0.412 | 16.9 | -- | -- | -- | -- |
| 124.47 | 0.52 | 8.69 | -2.44 | -- | -0.525 | -- | -- | 0.484 | -- | 29.95 | 2724 | -- | -- |
| 278.23 | 0.777 | 8.63 | -- | 0.156 | -0.69 | -- | -- | 0.777 | 17.6 | 30 | 2674 | -- | -- |
| 132.71 | 0.538 | 8.7 | -2.46 | -- | -- | -- | -- | 0.408 | -- | -- | -- | -- | -- |
| 290.34 | 0.797 | 8.64 | -- | 0.194 | -- | -- | -- | 0.685 | 16.5 | -- | -- | -- | -- |
| 280.04 | 0.779 | 8.62 | -- | -- | -0.676 | -- | -- | 0.77 | -- | 30 | 2677 | -- | -- |
| 292.35 | 0.798 | 8.64 | -- | -- | -- | -- | -- | 0.681 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.55 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 37 | 113.07 | radiation | 40.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 39 | 113.31 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 57 | 113.58 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 58 | 113.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 59 | 113.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 79 | 113.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 99 | 113.78 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 113 | 113.82 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 121 | 113.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 125 | 113.92 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 128 | 113.94 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 137 | 113.94 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 20 | 15 |
| 140 | 113.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 162 | 114.02 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 164 | 114.06 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 197 | 114.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 199 | 114.29 | radiation | 30.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 249 | 114.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 269 | 114.84 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 308 | 115.00 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 309 | 115.00 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 373 | 115.18 | radiation | 1.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 380 | 115.20 | radiation | 40.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 381 | 115.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 385 | 115.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 389 | 115.22 | radiation | 1.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 445 | 115.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 447 | 115.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 468 | 115.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 472 | 115.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 477 | 115.42 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 482 | 115.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 506 | 115.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 516 | 115.60 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 517 | 115.61 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 531 | 115.67 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 538 | 115.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 555 | 115.74 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 616 | 115.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 647 | 115.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 658 | 115.94 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 676 | 116.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 682 | 116.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 759 | 116.15 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 792 | 116.20 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 803 | 116.23 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 809 | 116.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 810 | 116.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 812 | 116.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 813 | 116.25 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 816 | 116.25 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 818 | 116.26 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 827 | 116.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 833 | 116.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 835 | 116.29 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 836 | 116.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 845 | 116.31 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 846 | 116.31 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 857 | 116.33 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 878 | 116.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 904 | 116.38 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 910 | 116.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 929 | 116.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 951 | 116.42 | wind | 9.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 954 | 116.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 960 | 116.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 963 | 116.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 983 | 116.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 987 | 116.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 994 | 116.47 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 999 | 116.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |