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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0211700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein Hsp70 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0327) R2 : 0.00118
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0506 (0.0689) R2dN8 : 0.00153 R2N8 : 0.00118
σ : 0.616
deviance : 174.44
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
159.62 0.594 2.95 0.162 0.152 2.78 -0.414 5.29 0.102 11.7 19.64 29 -- --
167.75 0.608 2.91 0.222 0.0951 0.759 -0.805 -- 0.118 12.9 20.55 22 -- --
160.1 0.589 2.95 0.159 0.175 3.16 -- 6.14 0.1 10.7 19.5 36 -- --
169.85 0.607 2.91 0.168 0.127 0.699 -- -- 0.112 9.91 20.7 5 -- --
161.58 0.592 2.96 0.148 -- 3.13 -- 6.19 0.0915 -- 19.44 36 -- --
171.77 0.614 2.92 0.0932 0.0108 -- -0.821 -- 0.0633 14.1 -- -- -- --
173.74 0.617 2.92 0.0678 0.103 -- -- -- 0.057 8.14 -- -- -- --
170.84 0.609 2.92 0.177 -- 0.675 -- -- 0.107 -- 20.59 4 -- --
170.66 0.608 2.92 -- 0.124 0.622 -- -- 0.0871 9.61 20.7 4 -- --
174.32 0.617 2.93 0.0687 -- -- -- -- 0.0582 -- -- -- -- --
173.86 0.617 2.93 -- 0.103 -- -- -- 0.0495 8.09 -- -- -- --
171.6 0.61 2.92 -- -- 0.579 -- -- 0.0827 -- 20.66 4 -- --
174.44 0.616 2.93 -- -- -- -- -- 0.0506 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 145.15 humidity 80 90 < th dose independent rect. 2 2
2 145.16 humidity 80 90 < th dose dependent rect. 2 2
3 145.18 humidity 90 10 < th dose dependent rect. 3 1
10 146.65 humidity 80 10 < th dose independent rect. 3 1
43 151.63 temperature 20 270 < th dose dependent rect. 23 2
48 153.68 temperature 20 90 < th dose dependent rect. 22 6
52 154.44 wind 3 10 > th dose dependent rect. 3 1
67 155.63 temperature 20 90 < th dose dependent rect. 15 13
76 155.80 temperature 20 90 < th dose dependent rect. 10 18
138 157.28 humidity 80 270 < th dose dependent rect. 24 4
140 157.31 temperature 20 90 < th dose independent rect. 22 6
146 157.42 temperature 20 90 < th dose dependent rect. 2 1
153 158.03 temperature 20 270 < th dose independent rect. 23 2
164 158.66 temperature 20 90 < th dose dependent sin 13 NA
206 159.04 temperature 20 30 < th dose dependent rect. 3 22
226 159.27 temperature 20 30 < th dose dependent rect. 23 14
227 159.28 temperature 20 30 < th dose dependent rect. 23 11
274 159.64 temperature 20 10 < th dose dependent rect. 24 1
293 159.80 humidity 80 10 < th dose independent rect. 24 5
418 160.36 temperature 20 30 < th dose dependent rect. 13 21
425 160.37 temperature 20 30 < th dose dependent rect. 15 19
437 160.40 temperature 20 30 < th dose dependent rect. 17 17
517 160.53 temperature 20 30 < th dose dependent no NA NA
541 160.62 temperature 20 90 < th dose independent rect. 13 15
556 160.69 temperature 20 90 < th dose independent rect. 17 11
764 161.14 wind 3 10 > th dose independent rect. 3 1
796 161.19 atmosphere 1005 30 > th dose dependent rect. 23 5
849 161.37 temperature 20 10 < th dose dependent rect. 13 12
851 161.38 temperature 20 10 < th dose dependent rect. 15 10
853 161.39 temperature 20 10 < th dose dependent rect. 17 8
855 161.39 temperature 20 10 < th dose dependent rect. 11 14
883 161.54 atmosphere 1015 30 < th dose independent rect. 15 23
966 161.80 atmosphere 1005 270 > th dose dependent rect. 23 2