Os04g0208800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0208800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.4 | 0.643 | 5.4 | 0.223 | 1.15 | 0.804 | -0.127 | 3.55 | -0.905 | 11.9 | 82.71 | 6532 | -- | -- |
| 204.02 | 0.665 | 5.37 | 0.168 | 1.13 | 0.835 | -0.328 | -- | -0.826 | 12 | 76 | 6534 | -- | -- |
| 187.46 | 0.638 | 5.4 | 0.22 | 1.16 | 0.805 | -- | 3.58 | -0.906 | 11.9 | 83 | 6541 | -- | -- |
| 204.03 | 0.665 | 5.37 | 0.109 | 1.14 | 0.974 | -- | -- | -0.87 | 11.8 | 76.71 | 6539 | -- | -- |
| 252.27 | 0.744 | 5.37 | -0.0325 | -- | 1.23 | -- | 0.0261 | -0.796 | -- | 83.98 | 6003 | -- | -- |
| 215.07 | 0.688 | 5.36 | 0.0459 | 1.1 | -- | -0.351 | -- | -0.834 | 12.1 | -- | -- | -- | -- |
| 215.61 | 0.688 | 5.36 | 0.032 | 1.1 | -- | -- | -- | -0.836 | 12.1 | -- | -- | -- | -- |
| 252.27 | 0.743 | 5.37 | -0.0326 | -- | 1.23 | -- | -- | -0.796 | -- | 83.98 | 6003 | -- | -- |
| 204.19 | 0.666 | 5.37 | -- | 1.14 | 0.939 | -- | -- | -0.875 | 11.9 | 76.09 | 6539 | -- | -- |
| 291.46 | 0.798 | 5.39 | -0.00263 | -- | -- | -- | -- | -0.851 | -- | -- | -- | -- | -- |
| 215.63 | 0.687 | 5.36 | -- | 1.1 | -- | -- | -- | -0.839 | 12.1 | -- | -- | -- | -- |
| 252.3 | 0.742 | 5.37 | -- | -- | 1.23 | -- | -- | -0.793 | -- | 83.98 | 6003 | -- | -- |
| 291.46 | 0.797 | 5.39 | -- | -- | -- | -- | -- | -0.851 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 2 | 174.24 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 3 | 174.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 8 | 174.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 11 | 175.32 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 40 | 176.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 41 | 176.63 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 43 | 176.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 44 | 176.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 45 | 176.71 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 49 | 176.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 54 | 176.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 57 | 176.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 68 | 177.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 69 | 177.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 70 | 177.35 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 77 | 177.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 78 | 177.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 80 | 177.47 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 82 | 177.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 85 | 177.54 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 97 | 177.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 98 | 177.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 116 | 177.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 117 | 177.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 121 | 177.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 122 | 177.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 123 | 177.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 132 | 178.02 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 145 | 178.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 148 | 178.18 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 149 | 178.18 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 156 | 178.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 164 | 178.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 167 | 178.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 169 | 178.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 199 | 178.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 238 | 179.21 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 271 | 179.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 282 | 179.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 313 | 180.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 314 | 180.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 343 | 180.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 344 | 180.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 350 | 180.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 351 | 180.39 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 367 | 180.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 385 | 180.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 389 | 180.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 390 | 180.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 402 | 180.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 408 | 180.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 410 | 180.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 425 | 181.00 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 452 | 181.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 455 | 181.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 494 | 181.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 525 | 181.76 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 528 | 181.77 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 544 | 181.87 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 545 | 181.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 547 | 181.87 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 549 | 181.88 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 570 | 182.03 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 572 | 182.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 573 | 182.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 574 | 182.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 590 | 182.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 592 | 182.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 599 | 182.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 608 | 182.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 613 | 182.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 614 | 182.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 648 | 182.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 12 |
| 650 | 182.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 12 |
| 651 | 182.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 652 | 182.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 667 | 182.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 675 | 182.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 12 |
| 676 | 182.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 678 | 182.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 681 | 182.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 690 | 182.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 716 | 182.60 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 717 | 182.61 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 727 | 182.64 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 772 | 182.87 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 789 | 182.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 840 | 183.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 864 | 183.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 865 | 183.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 890 | 183.30 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 893 | 183.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 924 | 183.49 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 935 | 183.54 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 986 | 183.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |