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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0206600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0333) R2 : 0.00695
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.125 (0.0702) R2dN8 : 0.00897 R2N8 : 0.00695
σ : 0.627
deviance : 180.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
169.65 0.612 2.76 0.894 0.186 -0.612 -0.665 2.29 0.294 22.8 25.28 5183 -- --
169.2 0.606 2.77 0.908 0.148 -0.761 -0.638 -- 0.454 22.6 14.73 38554 -- --
171.1 0.609 2.76 0.913 0.188 -0.647 -- 2.4 0.276 21.3 25.83 4918 -- --
170.68 0.608 2.77 0.943 0.164 -0.758 -- -- 0.455 22 13.5 40075 -- --
173.2 0.613 2.75 0.937 -- -0.627 -- 2.51 0.279 -- 25.84 4741 -- --
176.5 0.623 2.83 0.172 0.133 -- -0.678 -- 0.144 23.3 -- -- -- --
178.25 0.625 2.83 0.202 0.153 -- -- -- 0.148 21.6 -- -- -- --
172.3 0.611 2.76 0.995 -- -0.792 -- -- 0.474 -- 13.7 40408 -- --
176.33 0.622 2.82 -- 0.171 -0.532 -- -- 0.189 18.1 13.5 40075 -- --
179.64 0.626 2.83 0.203 -- -- -- -- 0.148 -- -- -- -- --
179.32 0.626 2.84 -- 0.154 -- -- -- 0.126 21.7 -- -- -- --
177.29 0.62 2.83 -- -- -0.311 -- -- 0.163 -- 22.4 4295 -- --
180.73 0.627 2.83 -- -- -- -- -- 0.125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 159.70 atmosphere 1000.0 30 > th dose independent rect. 24 1
2 159.70 wind 5.0 30 < th dose dependent rect. 24 1
5 159.81 atmosphere 1015.0 30 < th dose independent rect. 24 1
6 159.82 temperature 20.0 30 > th dose independent rect. 24 1
7 159.84 wind 3.0 30 < th dose independent rect. 24 1
8 159.84 humidity 80.0 30 > th dose independent rect. 24 1
9 159.85 atmosphere 995.0 30 > th dose dependent rect. 24 1
10 159.86 temperature 10.0 30 > th dose dependent rect. 24 1
15 159.96 temperature 10.0 30 > th dose independent rect. 24 1
16 159.96 temperature 30.0 30 < th dose independent rect. 24 1
17 159.96 humidity 50.0 30 > th dose independent rect. 24 1
21 159.96 radiation 1.0 30 < th dose independent rect. 24 1
26 159.96 precipitation 0.1 30 < th dose independent rect. 24 1
27 159.96 temperature 10.0 30 > th dose independent rect. 1 23
28 159.96 radiation 1.0 30 < th dose dependent rect. 24 1
33 159.96 precipitation 0.1 30 < th dose dependent rect. 24 1
34 159.97 temperature 10.0 1440 > th dose independent rect. 1 1
37 159.97 temperature 30.0 1440 < th dose independent rect. 1 1
41 159.97 humidity 50.0 1440 > th dose independent rect. 1 1
51 159.97 atmosphere 995.0 1440 > th dose independent rect. 1 1
52 159.97 radiation 1.0 1440 < th dose independent rect. 1 1
72 159.97 temperature 10.0 1440 > th dose independent rect. 2 23
75 159.97 radiation 1.0 1440 < th dose dependent rect. 1 1
81 160.04 humidity 50.0 30 > th dose dependent rect. 24 1
89 160.37 humidity 90.0 30 < th dose independent rect. 24 1
91 160.45 wind 1.0 30 > th dose independent rect. 24 1
95 160.86 wind 9.0 1440 < th dose independent rect. 1 1
98 161.04 humidity 90.0 30 < th dose dependent rect. 24 1
101 161.24 atmosphere 1015.0 30 < th dose dependent rect. 24 1
105 161.66 temperature 30.0 30 < th dose dependent rect. 24 1
108 161.77 wind 9.0 30 < th dose independent rect. 1 23
114 162.39 wind 1.0 30 > th dose dependent rect. 24 1
142 162.85 temperature 10.0 30 > th dose dependent rect. 1 23
155 163.85 temperature 25.0 90 < th dose dependent rect. 8 11
158 164.24 temperature 25.0 30 < th dose dependent sin 21 NA
164 164.64 temperature 25.0 90 < th dose dependent rect. 8 13
194 165.44 wind 1.0 43200 < th dose dependent rect. 16 3
203 165.55 temperature 25.0 90 < th dose dependent rect. 16 3
207 165.62 temperature 25.0 90 < th dose independent rect. 16 3
208 165.63 temperature 25.0 90 < th dose dependent rect. 11 8
214 165.94 wind 1.0 43200 > th dose independent rect. 17 2
215 165.96 wind 1.0 43200 < th dose independent rect. 17 2
216 166.00 temperature 25.0 90 < th dose dependent rect. 8 15
229 166.38 temperature 25.0 10 < th dose dependent rect. 17 1
252 166.67 atmosphere 1015.0 1440 < th dose independent rect. 1 1
293 167.04 temperature 25.0 14400 > th dose dependent rect. 21 16
298 167.06 temperature 25.0 14400 > th dose dependent rect. 24 13
309 167.09 temperature 25.0 14400 > th dose dependent rect. 4 9
311 167.10 temperature 25.0 14400 > th dose dependent rect. 6 7
316 167.11 temperature 25.0 14400 > th dose dependent sin 7 NA
319 167.11 temperature 25.0 14400 > th dose dependent rect. 9 1
354 167.17 atmosphere 1015.0 14400 > th dose dependent rect. 20 1
408 167.31 temperature 25.0 14400 > th dose independent rect. 1 9
409 167.31 wind 1.0 14400 < th dose dependent rect. 4 1
421 167.34 temperature 25.0 14400 > th dose dependent rect. 12 1
434 167.36 atmosphere 1015.0 14400 > th dose dependent rect. 13 8
441 167.38 temperature 25.0 14400 < th dose independent rect. 3 7
453 167.41 temperature 30.0 14400 < th dose independent rect. 14 1
464 167.43 radiation 1.0 43200 > th dose independent rect. 6 1
465 167.43 radiation 1.0 43200 < th dose independent rect. 6 1
485 167.47 temperature 25.0 14400 < th dose independent rect. 8 1
506 167.51 humidity 90.0 43200 > th dose dependent rect. 18 1
530 167.57 temperature 30.0 14400 > th dose independent rect. 13 2
538 167.58 temperature 25.0 14400 > th dose independent rect. 8 1
542 167.58 temperature 30.0 14400 < th dose independent rect. 10 6
546 167.58 temperature 25.0 14400 > th dose dependent no NA NA
555 167.59 temperature 30.0 14400 < th dose independent rect. 2 14
568 167.59 temperature 25.0 14400 > th dose dependent rect. 5 21
573 167.59 temperature 25.0 14400 > th dose dependent rect. 1 23
581 167.60 temperature 25.0 14400 > th dose independent sin 7 NA
610 167.61 temperature 25.0 14400 > th dose dependent rect. 6 18
623 167.61 temperature 25.0 14400 > th dose dependent rect. 12 23
630 167.62 atmosphere 1015.0 14400 > th dose dependent rect. 13 5
644 167.63 atmosphere 1015.0 14400 > th dose independent rect. 14 3
645 167.63 atmosphere 1015.0 14400 < th dose independent rect. 15 5
676 167.65 precipitation 0.1 30 < th dose independent rect. 1 23
687 167.65 precipitation 0.1 30 < th dose dependent rect. 1 23
688 167.66 temperature 30.0 14400 > th dose independent rect. 10 6
726 167.67 humidity 80.0 43200 > th dose dependent rect. 2 12
772 167.70 temperature 25.0 14400 < th dose independent sin 7 NA
795 167.71 radiation 1.0 43200 < th dose independent rect. 2 5
834 167.73 radiation 1.0 43200 > th dose independent rect. 10 2
841 167.74 radiation 1.0 43200 < th dose independent rect. 10 2
857 167.74 radiation 1.0 43200 < th dose dependent rect. 10 2
915 167.78 radiation 1.0 43200 < th dose independent rect. 9 4
932 167.79 humidity 80.0 43200 > th dose dependent rect. 20 3
938 167.80 radiation 1.0 43200 > th dose independent rect. 9 4
941 167.80 humidity 80.0 43200 > th dose dependent rect. 21 1
951 167.81 temperature 30.0 14400 < th dose independent sin 1 NA
959 167.81 humidity 90.0 43200 > th dose dependent rect. 14 10
973 167.82 temperature 30.0 14400 < th dose independent rect. 13 22
988 167.83 humidity 80.0 43200 > th dose dependent sin 4 NA
994 167.83 humidity 80.0 43200 > th dose dependent rect. 2 22