Os04g0204200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0204200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.08 | 0.484 | 3.13 | -0.572 | 0.18 | 1.66 | 0.0975 | -3.71 | 1.18 | 3.71 | 25.44 | 101 | -- | -- |
| 110.13 | 0.489 | 3.07 | -0.146 | 0.146 | 1.36 | 0.614 | -- | 1.28 | 3.58 | 25.41 | 121 | -- | -- |
| 106.1 | 0.48 | 3.13 | -0.575 | 0.182 | 1.66 | -- | -3.77 | 1.18 | 3.74 | 25.43 | 102 | -- | -- |
| 111.11 | 0.491 | 3.07 | -0.162 | 0.142 | 1.32 | -- | -- | 1.29 | 4.23 | 25.46 | 121 | -- | -- |
| 107.18 | 0.482 | 3.12 | -0.524 | -- | 1.5 | -- | -3.66 | 1.21 | -- | 25.61 | 99 | -- | -- |
| 138.52 | 0.552 | 3.06 | 0.0581 | 0.396 | -- | -0.1 | -- | 1.37 | 15.6 | -- | -- | -- | -- |
| 138.55 | 0.551 | 3.06 | 0.0565 | 0.396 | -- | -- | -- | 1.37 | 15.7 | -- | -- | -- | -- |
| 111.62 | 0.492 | 3.07 | -0.122 | -- | 1.22 | -- | -- | 1.3 | -- | 25.52 | 99 | -- | -- |
| 111.62 | 0.492 | 3.07 | -- | 0.12 | 1.28 | -- | -- | 1.32 | 4.72 | 25.6 | 125 | -- | -- |
| 147.26 | 0.567 | 3.06 | 0.0399 | -- | -- | -- | -- | 1.36 | -- | -- | -- | -- | -- |
| 138.64 | 0.551 | 3.06 | -- | 0.395 | -- | -- | -- | 1.36 | 15.7 | -- | -- | -- | -- |
| 112.02 | 0.493 | 3.07 | -- | -- | 1.19 | -- | -- | 1.32 | -- | 25.63 | 99 | -- | -- |
| 147.3 | 0.566 | 3.06 | -- | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.63 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 2 | 102.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 3 | 102.75 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 4 | 102.96 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 5 | 103.02 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 21 | 103.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 22 | 103.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 23 | 103.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 24 | 103.08 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 38 | 103.22 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 54 | 103.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 65 | 103.42 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 80 | 103.62 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 82 | 103.68 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 251 | 104.66 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 252 | 104.68 | temperature | 25 | 720 | > th | dose dependent | sin | 7 | NA |
| 273 | 104.74 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 344 | 104.97 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 357 | 105.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 374 | 105.01 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 379 | 105.07 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 471 | 105.08 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 491 | 105.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 496 | 105.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 499 | 105.12 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 572 | 105.15 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 597 | 105.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 646 | 105.48 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 660 | 105.57 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 663 | 105.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 670 | 105.67 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 742 | 105.94 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 743 | 105.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 11 |
| 759 | 105.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 763 | 106.01 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 771 | 106.09 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 811 | 106.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 865 | 106.39 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 915 | 106.50 | temperature | 25 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 923 | 106.53 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 978 | 106.65 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |